RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 ARL15Q9NXU5 204 aa10.8□□□□□ -0.68
TMEM55A-202ENST00000518359 ATG4BQ9Y4P1 393 aa10.8□□□□□ -0.68
TMEM55A-202ENST00000518359 ARID1AO14497 2285 aa10.8□□□□□ -0.68
TMEM55A-202ENST00000518359 NRDCO43847 1150 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 SMPD2O60906 423 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 SERPINA6P08185 405 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 SMIM10L1P0DMW3 83 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 CCL3P10147 92 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 SAT1P21673 171 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 AP1S2P56377 157 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 BTN3A2P78410 334 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 REEP5Q00765 189 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 DHX9Q08211 1270 aaKnown RBP10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 RCN2Q14257 317 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 SIX1Q15475 284 aaPredicted RBP10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 ACSF3Q4G176 576 aaPredicted RBP10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 TOR1AIP1Q5JTV8 583 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 SEM1Q6ZVN7 128 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 GSTA5Q7RTV2 222 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 CXorf67Q86X51 503 aaPredicted RBP10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 DENND6AQ8IWF6 608 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 ZNF595Q8IYB9 648 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 TXLNBQ8N3L3 684 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 OR56A3Q8NH54 315 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 NEIL3Q8TAT5 605 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 LINC01560Q8TB33 94 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 CALML6Q8TD86 181 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 EEF1AKMT1Q8WVE0 214 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 SMPDL3BQ92485 455 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 ZNF592Q92610 1267 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 PIGTQ969N2 578 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 NEIL2Q969S2 332 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 GAL3ST3Q96A11 431 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 ZNF669Q96BR6 464 aaPredicted RBP10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 SMIM10Q96HG1 83 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 Q96MF0 132 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 PIP5K1AQ99755 562 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 TRIM54Q9BYV2 358 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 SPNS1Q9H2V7 528 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 PELI2Q9HAT8 420 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 ACKR4Q9NPB9 350 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 DYRK1BQ9Y463 629 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 DOCK7Q96N67 2140 aa10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 CHD3Q12873 2000 aaKnown RBP10.79□□□□□ -0.68
TMEM55A-202ENST00000518359 NINQ8N4C6 2090 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 C15orf38-AP3S2A0A0A6YYH1 394 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 MAGEB16A2A368 324 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 EEF1E1-BLOC1S5C9J1V9 151 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 INAFM1C9JVW0 142 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 SMAD7O15105 426 aaKnown RBP10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 EEF1E1O43324 174 aaKnown RBP10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 B3GALT2O43825 422 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 HRGP04196 525 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 BMP7P18075 431 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 OPRM1P35372 400 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 PIGAP37287 484 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 SLC1A2P43004 574 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 RAB38P57729 211 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 RNF4P78317 190 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 RBBP5Q15291 538 aaKnown RBP10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 POU4F3Q15319 338 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 SLC22A10Q63ZE4 541 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 PRSS57Q6UWY2 283 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 CLNKQ7Z7G1 428 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 PM20D2Q8IYS1 436 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 LRRC25Q8N386 305 aaPredicted RBP10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 ANKRD53Q8N9V6 530 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 SREK1Q8WXA9 508 aaKnown RBP10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 CAPZA3Q96KX2 299 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 TSNARE1Q96NA8 513 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 OR4K3Q96R72 315 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 OR8D2Q9GZM6 311 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 KLHL31Q9H511 634 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 ZFP64Q9NPA5 681 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 SEMA4BQ9NPR2 832 aaPredicted RBP10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 TAS2R13Q9NYV9 303 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 COPS7AQ9UBW8 275 aa10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 EIF3LQ9Y262 564 aaKnown RBP10.78□□□□□ -0.68
TMEM55A-202ENST00000518359 C4orf51C9J302 202 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 TGFBR3LH3BV60 316 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 CASKO14936 926 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 F7P08709 466 aaPredicted RBP10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 TNNI3P19429 210 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 HPDP32754 393 aaPredicted RBP10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 ZNF136P52737 540 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 KIF5AQ12840 1032 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 STX4Q12846 297 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 CCNG2Q16589 344 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 MPEG1Q2M385 716 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 POMZP3Q6PJE2 187 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 TMPRSS11BQ86T26 416 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 SPNS2Q8IVW8 549 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 DND1Q8IYX4 353 aaKnown RBP10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 CIARTQ8N365 385 aaPredicted RBP10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 VWA5B2Q8N398 1253 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 FAM47BQ8NA70 645 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 TTLQ8NG68 377 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 SLC22A8Q8TCC7 542 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 ISL2Q96A47 359 aa10.77□□□□□ -0.69
TMEM55A-202ENST00000518359 FBXL8Q96CD0 374 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms