RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 NKG7Q16617 165 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 NHSL2Q5HYW2 709 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 CRB2Q5IJ48 1285 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 GCNT6Q5T4J0 391 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 NDUFAF5Q5TEU4 345 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 KLHL35Q6PF15 583 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 UGT2A3Q6UWM9 527 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 ENPP6Q6UWR7 440 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 OOSP2Q86WS3 158 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 CHERPQ8IWX8 916 aaKnown RBP7.94□□□□□ -1.14
RNF4-220ENST00000513578 SAMD14Q8IZD0 417 aaPredicted RBP7.94□□□□□ -1.14
RNF4-220ENST00000513578 GALNT4Q8N4A0 578 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 FAM160A2Q8N612 972 aaPredicted RBP7.94□□□□□ -1.14
RNF4-220ENST00000513578 AMER3Q8N944 861 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 ZFP28Q8NHY6 868 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 FBXO30Q8TB52 745 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 SFXN5Q8TD22 340 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 UTP15Q8TED0 518 aaKnown RBP7.94□□□□□ -1.14
RNF4-220ENST00000513578 TFAP2CQ92754 450 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 NCLNQ969V3 563 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 MOAP1Q96BY2 351 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 SERINC2Q96SA4 455 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 CIB1Q99828 191 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 ZFYVE21Q9BQ24 234 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.94□□□□□ -1.14
RNF4-220ENST00000513578 CHRNA10Q9GZZ6 450 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 RAB33BQ9H082 229 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 CXorf36Q9H7Y0 433 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 SYNPO2LQ9H987 977 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 TM9SF3Q9HD45 589 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 CD320Q9NPF0 282 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 IL1RAPQ9NPH3 570 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 SLC35C2Q9NQQ7 365 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 HRASLS2Q9NWW9 162 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 TEX10Q9NXF1 929 aaPredicted RBP7.94□□□□□ -1.14
RNF4-220ENST00000513578 USE1Q9NZ43 259 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 PHF11Q9UIL8 331 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 CES1P1Q9UKY3 287 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 POMT2Q9UKY4 750 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 FAF1Q9UNN5 650 aaPredicted RBP7.94□□□□□ -1.14
RNF4-220ENST00000513578 GOLGA4Q13439 2230 aaKnown RBP7.94□□□□□ -1.14
RNF4-220ENST00000513578 CACNA1IQ9P0X4 2223 aa7.94□□□□□ -1.14
RNF4-220ENST00000513578 TRBV23OR9-2A0A075B6M9 112 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 A0A1W2PR48 441 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 FAM149AA5PLN7 773 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 A6NHS1 94 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 C4orf51C9J302 202 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 H0YAE9 185 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 DLGAP1O14490 977 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 ZSCAN9O15535 394 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 NOBOXO60393 691 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 TPST1O60507 370 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 GCM2O75603 506 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 IFNA14P01570 189 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 C1QCP02747 245 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SERPIND1P05546 499 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 CELA2BP08218 269 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 POLR2CP19387 275 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 MAGP20916 626 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 ZNF10P21506 573 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 CHI3L1P36222 383 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 GTF2A1P52655 376 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 PLA2G16P53816 162 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 MANFP55145 182 aaKnown RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 PCBP3P57721 371 aaKnown RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 HNRNPKP61978 463 aaKnown RBP eCLIP7.93□□□□□ -1.14
RNF4-220ENST00000513578 SELENOWP63302 87 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 RPL6Q02878 288 aaKnown RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 HHEXQ03014 270 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 EPS8Q12929 822 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 GK3PQ14409 553 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SUZ12Q15022 739 aaKnown RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 PDK3Q15120 406 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 WDR45BQ5MNZ6 344 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.93□□□□□ -1.14
RNF4-220ENST00000513578 SLC48A1Q6P1K1 146 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 PATL1Q86TB9 770 aaKnown RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 CARM1Q86X55 608 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 FAM20CQ8IXL6 584 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 CBR4Q8N4T8 237 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 ZNF655Q8N720 491 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 FAM86B1Q8N7N1 296 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 FAM46DQ8NEK8 389 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 OR8K5Q8NH50 307 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 OR5K1Q8NHB7 308 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 PATE1Q8WXA2 126 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 JPH3Q8WXH2 748 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 TMBIM1Q969X1 311 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 NRBF2Q96F24 287 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 AMDHD1Q96NU7 426 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 NPLQ9BXD5 320 aaPredicted RBP7.93□□□□□ -1.14
RNF4-220ENST00000513578 ANKRD60Q9BZ19 345 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 GABARAPL1Q9H0R8 117 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SEMA6CQ9H3T2 930 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 ERVMER34-1Q9H9K5 563 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 LYRM4Q9HD34 91 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 A4GALTQ9NPC4 353 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SLAMF7Q9NQ25 335 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 ENAMQ9NRM1 1142 aa7.93□□□□□ -1.14
RNF4-220ENST00000513578 SIRT3Q9NTG7 399 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms