RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PCNAP12004 261 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ATP5F1P24539 256 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ATP5A1P25705 553 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 CRHR1P34998 444 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 BSGP35613 385 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 PLA2G16P53816 162 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 LIM2P55344 173 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 HERVK_113P63132 956 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 BTN3A2P78410 334 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 MC1RQ01726 317 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ID2Q02363 134 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 CLCQ05315 142 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 DUSP2Q05923 314 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 RGS1Q08116 209 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 TBL3Q12788 808 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 NFATC3Q12968 1075 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 SSPNQ14714 243 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 HERC3Q15034 1050 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 RBBP7Q16576 425 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 PRSS53Q2L4Q9 553 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 NADK2Q4G0N4 442 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 BEND6Q5SZJ8 279 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 KHDRBS2Q5VWX1 349 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 B3GNTL1Q67FW5 361 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 MRM1Q6IN84 353 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 MED27Q6P2C8 311 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 KLC3Q6P597 504 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 MED25Q71SY5 747 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 RAB43Q86YS6 212 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 IQCKQ8N0W5 287 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 KIF2BQ8N4N8 673 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF321PQ8N8H1 164 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 GOLM1Q8NBJ4 401 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 NFAM1Q8NET5 270 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 OR2L5Q8NG80 312 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 OR6Y1Q8NGX8 325 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 TRPC4APQ8TEL6 797 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 THAP4Q8WY91 577 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF382Q96SR6 550 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 MTERF1Q99551 399 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 SMAD5Q99717 465 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 NTMT1Q9BV86 223 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ERVK-6Q9BXR3 956 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 TRIM4Q9C037 500 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 REXO4Q9GZR2 422 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ZNF700Q9H0M5 742 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 EPN3Q9H201 632 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 ANKHQ9HCJ1 492 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 SEMA3GQ9NS98 782 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 TEX10Q9NXF1 929 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 GPR83Q9NYM4 423 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 LUZP4Q9P127 313 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 NXT1Q9UKK6 140 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 NTNG1Q9Y2I2 539 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 PADI2Q9Y2J8 665 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 TSC22D4Q9Y3Q8 395 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 IKBKGQ9Y6K9 419 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
TOPBP1-207ENST00000509162 PRRC2CQ9Y520 2896 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 TCRBV16S1A1N1A0A5B0 115 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 TMEM233B4DJY2 109 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 HRKO00198 91 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 TXNDC9O14530 226 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 MSTNO14793 375 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 FGF17O60258 216 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 UGDHO60701 494 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 HPP00738 406 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 PDYNP01213 254 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 GBAP04062 536 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 CLPSP04118 112 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 GSTA1P08263 222 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 KRT4P19013 534 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 HIST1H1TP22492 207 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 TPP2P29144 1249 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 PTGER1P34995 402 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 GRK3P35626 688 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 AVPR1BP47901 424 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 CCL11P51671 97 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 EMP2P54851 167 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 SOX8P57073 446 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 RAB38P57729 211 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 RAE1P78406 368 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 ABRAXAS2Q15018 415 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 NDUFA9Q16795 377 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 TUBB8Q3ZCM7 444 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 MINDY4Q4G0A6 757 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 LACTB2Q53H82 288 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 C18orf63Q68DL7 685 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 FCRLBQ6BAA4 426 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 QSOX2Q6ZRP7 698 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 ZCCHC23Q6ZST2 131 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 FRMD7Q6ZUT3 714 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 CLNKQ7Z7G1 428 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 C10orf107Q8IVU9 208 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 SRRM1Q8IYB3 904 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 KRT78Q8N1N4 520 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 GALNT16Q8N428 558 aa6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 RIBC1Q8N443 379 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-207ENST00000509162 LSM14AQ8ND56 463 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms