RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 DHX34Q14147 1143 aaKnown RBP8.67□□□□□ -1.02
NEDD9-211ENST00000508546 CSHL1Q14406 222 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 PCBP2Q15366 365 aaKnown RBP eCLIP8.67□□□□□ -1.027e-6■□□□□ 9.5
NEDD9-211ENST00000508546 CCNG2Q16589 344 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 PHKG1Q16816 387 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 CATSPEREQ5SY80 951 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 POMZP3Q6PJE2 187 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 OPN5Q6U736 354 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 HSDL2Q6YN16 418 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 MAATS1Q7Z4T9 603 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 LMNTD2Q8IXW0 634 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 ULK2Q8IYT8 1036 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 NAXEQ8NCW5 288 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 OR8K3Q8NH51 312 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 CALML6Q8TD86 181 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 EEF1AKMT1Q8WVE0 214 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 DAZLQ92904 295 aaKnown RBP8.67□□□□□ -1.02
NEDD9-211ENST00000508546 NEIL2Q969S2 332 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 PYCR2Q96C36 320 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 HIST1H2AHQ96KK5 128 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 HIST1H2AJQ99878 128 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 H2AFJQ9BTM1 129 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 KLHL31Q9H511 634 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 EXO5Q9H790 373 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 PRTFDC1Q9NRG1 225 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 QPCTLQ9NXS2 382 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 ALKBH4Q9NXW9 302 aa8.67□□□□□ -1.02
NEDD9-211ENST00000508546 TRMT6Q9UJA5 497 aaKnown RBP8.67□□□□□ -1.02
NEDD9-211ENST00000508546 MED12Q93074 2177 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 ZCWPW2A0A1B0GU75 182 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 TCRBV7S3A2A0A539 114 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 CTAGE15A4D2H0 777 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 CLCA1A8K7I4 914 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 AHRRA9YTQ3 701 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 C4orf51C9J302 202 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 H7C1Q1 480 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SIX3O95343 332 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 F12P00748 615 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 CCL3P10147 92 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SLC1A2P43004 574 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 MAGEA6P43360 314 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 RAB38P57729 211 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 STXBP1P61764 594 aaKnown RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SARNPP82979 210 aaKnown RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 TIAL1Q01085 375 aaKnown RBP eCLIP8.66□□□□□ -1.022e-8■□□□□ 10.6
NEDD9-211ENST00000508546 TBL3Q12788 808 aaKnown RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SLC13A2Q13183 592 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 BMPR2Q13873 1038 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 RUNX2Q13950 521 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SIX1Q15475 284 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 CASC4Q6P4E1 433 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 RAD9BQ6WBX8 426 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 KIAA1328Q86T90 577 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 CTAGE6Q86UF2 777 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 CAND1Q86VP6 1230 aaKnown RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 CXorf67Q86X51 503 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 LACC1Q8IV20 430 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF595Q8IYB9 648 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 LRRC75A-AS1Q8N1F1 130 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 MYO1HQ8N1T3 1032 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 MORN4Q8NDC4 146 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SIMC1Q8NDZ2 872 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 NEIL3Q8TAT5 605 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SLC5A11Q8WWX8 675 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 ATL1Q8WXF7 558 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 GAL3ST3Q96A11 431 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF669Q96BR6 464 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 FBXL8Q96CD0 374 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 AIF1LQ9BQI0 150 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 AICDAQ9GZX7 198 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF703Q9H7S9 590 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 PELI2Q9HAT8 420 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SH2D2AQ9NP31 389 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 ACKR4Q9NPB9 350 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SEMA4BQ9NPR2 832 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 ARL15Q9NXU5 204 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 TAS2R13Q9NYV9 303 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 VTI1BQ9UEU0 232 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 FBXO5Q9UKT4 447 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 MRPS33Q9Y291 106 aaKnown RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 CLCA3PQ9Y6N3 262 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.66□□□□□ -1.02
NEDD9-211ENST00000508546 EXPH5Q8NEV8 1989 aa8.66□□□□□ -1.02
NEDD9-211ENST00000508546 PABPN1LA6NDY0 278 aaKnown RBP8.65□□□□□ -1.02
NEDD9-211ENST00000508546 ZSCAN12O43309 604 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF354AO60765 605 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-211ENST00000508546 HAUS5O94927 633 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 IL2RAP01589 272 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 HRGP04196 525 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 CCDC175P0C221 793 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 MLNP12872 115 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 HNRNPFP52597 415 aaKnown RBP8.65□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF136P52737 540 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 RNF4P78317 190 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 BTN3A2P78410 334 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 KIF5AQ12840 1032 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 MPEG1Q2M385 716 aa8.65□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF791Q3KP31 576 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-211ENST00000508546 ACSF3Q4G176 576 aaPredicted RBP8.65□□□□□ -1.02
NEDD9-211ENST00000508546 TOR1AIP1Q5JTV8 583 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms