RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 INPP4BO15327 924 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 SIGLEC5O15389 551 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 LRCH4O75427 683 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 CLDN1O95832 211 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 ANGPTL1O95841 491 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 CGAP01215 116 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 ALPPP05187 535 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 LYNP07948 512 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 RNF224P0DH78 156 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 ALPPL2P10696 532 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 EZRP15311 586 aaKnown RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 AHCYP23526 432 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 EDNRAP25101 427 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 MAPK3P27361 379 aaPredicted RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 MARCKSP29966 332 aaPredicted RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 LUMP51884 338 aaPredicted RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 ABCE1P61221 599 aaKnown RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 BTG1P62324 171 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 MFGE8Q08431 387 aaPredicted RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 HSPA14Q0VDF9 509 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 DRP2Q13474 957 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 SMC1AQ14683 1233 aaKnown RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 HEPACAMQ14CZ8 416 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 C1orf189Q5VU69 101 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 TRIM65Q6PJ69 517 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 LCLAT1Q6UWP7 414 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 DLEU7Q6UYE1 221 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 Q71RC1 249 aaPredicted RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 ZNF614Q8N883 585 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 OR9Q2Q8NGE9 314 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 OR6M1Q8NGM8 313 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 OR2T6Q8NHC8 308 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 ZNF519Q8TB69 540 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 GOLGA5Q8TBA6 731 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 KIAA1524Q8TCG1 905 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 CDHR1Q96JP9 859 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 ART5Q96L15 291 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 TMEM237Q96Q45 408 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 SPAG8Q99932 426 aaPredicted RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 PINK1Q9BXM7 581 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 ABCG4Q9H172 646 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 CARD9Q9H257 536 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 DCLRE1BQ9H816 532 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 MED17Q9NVC6 651 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 TEX10Q9NXF1 929 aaPredicted RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 TMEM181Q9P2C4 612 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 CACNG5Q9UF02 275 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 KCNN3Q9UGI6 736 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 NARFQ9UHQ1 456 aa3.43□□□□□ -1.86
SMC4-225ENST00000497203 HOOK1Q9UJC3 728 aaKnown RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 EXOGQ9Y2C4 368 aaKnown RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 RPH3AQ9Y2J0 694 aaPredicted RBP3.43□□□□□ -1.86
SMC4-225ENST00000497203 IGLV7-46A0A075B6I9 117 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 MACROD2A1Z1Q3 448 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 KPNA7A9QM74 516 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 NPIPB9F8W1W9 429 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 K7EQD1 137 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 ARHGEF9O43307 516 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 TNFSF12O43508 249 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 ZFAND5O76080 213 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 CXCL14O95715 111 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 GAP43P17677 238 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 FCARP24071 287 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 RPL9P32969 192 aaKnown RBP3.42□□□□□ -1.86
SMC4-225ENST00000497203 CNN1P51911 297 aaKnown RBP3.42□□□□□ -1.86
SMC4-225ENST00000497203 HNRNPFP52597 415 aaKnown RBP3.42□□□□□ -1.86
SMC4-225ENST00000497203 GEMP55040 296 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 TMEM50BP56557 158 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 BACE1P56817 501 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 GSCP56915 257 aaPredicted RBP3.42□□□□□ -1.86
SMC4-225ENST00000497203 EVCP57679 992 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 SRP54P61011 504 aaKnown RBP3.42□□□□□ -1.86
SMC4-225ENST00000497203 CDKL1Q00532 357 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 TMEM187Q14656 261 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 OR1C1Q15619 314 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 PKN2Q16513 984 aaKnown RBP3.42□□□□□ -1.86
SMC4-225ENST00000497203 CCDC40Q4G0X9 1142 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 MPPE1Q53F39 396 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 DDI2Q5TDH0 399 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 CAPN13Q6MZZ7 669 aaPredicted RBP3.42□□□□□ -1.86
SMC4-225ENST00000497203 NEK5Q6P3R8 708 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 C3P1Q6ZMU1 363 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 Q6ZRP5 223 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 CACUL1Q86Y37 369 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 MRPL43Q8N983 215 aaKnown RBP3.42□□□□□ -1.86
SMC4-225ENST00000497203 CCNYQ8ND76 341 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 TMEM185AQ8NFB2 350 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 GPR148Q8TDV2 347 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 U2AF1L4Q8WU68 220 aaKnown RBP3.42□□□□□ -1.86
SMC4-225ENST00000497203 TCP11Q8WWU5 503 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 TMEM186Q96B77 213 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 RPGRIP1Q96KN7 1286 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 NSMCE2Q96MF7 247 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 ERGIC2Q96RQ1 377 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 AGPAT1Q99943 283 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 C1orf21Q9H246 121 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 KCNK13Q9HB14 408 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 HOMER3Q9NSC5 361 aa3.42□□□□□ -1.86
SMC4-225ENST00000497203 ZDHHC18Q9NUE0 388 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms