RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 NUDT4Q9NZJ9 180 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 CD274Q9NZQ7 290 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 ADGRE2Q9UHX3 823 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 MRPS33Q9Y291 106 aaKnown RBP7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 FREM3P0C091 2139 aa7.79□□□□□ -1.16
SMARCB1-207ENST00000491967 F8P00451 2351 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 A0A0G2JN53 185 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 ARHGAP10A1A4S6 786 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 A8MUA0 341 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 PEX1O43933 1283 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 FAM155BO75949 473 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 GLSO94925 669 aaPredicted RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 CLDN14O95500 239 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 IGKV3-11P04433 115 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 LTA4HP09960 611 aaKnown RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 IGFBP2P18065 325 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 HIST1H1TP22492 207 aaPredicted RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 CERS1P27544 350 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 GMPRP36959 345 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 PIK3CBP42338 1070 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 MAGEA4P43358 317 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 SMSP52788 366 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 PLTPP55058 493 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 IRF8Q02556 426 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 TGM3Q08188 693 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 SLC13A2Q13183 592 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 CHIT1Q13231 466 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 BIKQ13323 160 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 SERTAD2Q14140 314 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 NAA30Q147X3 362 aaPredicted RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 MPEG1Q2M385 716 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 HYAL4Q2M3T9 481 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 FBXO48Q5FWF7 155 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 PAGE2BQ5JRK9 111 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 DEPDC1Q5TB30 811 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 METTL2BQ6P1Q9 378 aaKnown RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 MED27Q6P2C8 311 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 CAPN12Q6ZSI9 719 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 CMC1Q7Z7K0 106 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 MCEMP1Q8IX19 187 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 CENPLQ8N0S6 344 aaPredicted RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 CYP4Z2PQ8N1L4 340 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 ZCCHC7Q8N3Z6 543 aaKnown RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 OR7G3Q8NG95 312 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 OR14A16Q8NHC5 309 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 FAM57AQ8TBR7 257 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 FBF1Q8TES7 1133 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF721Q8TF20 911 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 AGAP11Q8TF27 550 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 DAZLQ92904 295 aaKnown RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 UBE2E3Q969T4 207 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 TMEM125Q96AQ2 219 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 MAGED4Q96JG8 741 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 MAPKAP1Q9BPZ7 522 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 SPOCK3Q9BQ16 436 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 ZNF717Q9BY31 904 aaPredicted RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 FUT8Q9BYC5 575 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 ALOXE3Q9BYJ1 711 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 TSPAN10Q9H1Z9 355 aaPredicted RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 ALG9Q9H6U8 611 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 ZDHHC11Q9H8X9 412 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 NMRAL1Q9HBL8 299 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 SH2D2AQ9NP31 389 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 PNO1Q9NRX1 252 aaKnown RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 ZDHHC18Q9NUE0 388 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 WWOXQ9NZC7 414 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 TXNDC16Q9P2K2 825 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 RNF112Q9ULX5 631 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 PPT2Q9UMR5 302 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 UTP11Q9Y3A2 253 aaKnown RBP7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 CSMD1Q96PZ7 3565 aa7.78□□□□□ -1.16
SMARCB1-207ENST00000491967 A0A1B0GVC2 190 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 H0YIV9 168 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 C19orf84I3L1E1 186 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 K7EPI3 171 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 UGDHO60701 494 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 ZNF354AO60765 605 aaPredicted RBP7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 OR2J2O76002 312 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 OR6B1O95007 311 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 ETHE1O95571 254 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 IGHG3P01860 377 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 TUBB4AP04350 444 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 ESRRAP11474 423 aaPredicted RBP7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 STX2P32856 288 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 PTGER1P34995 402 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 MSH2P43246 934 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 KIR3DL1P43629 444 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 MEOX1P50221 254 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 SSR4P51571 173 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 RNF4P78317 190 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 HSF1Q00613 529 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 C2orf54Q08AI8 447 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 FOXO1Q12778 655 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 SETDB1Q15047 1291 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 ACAP2Q15057 778 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 PCBP2Q15366 365 aaKnown RBP eCLIP7.77□□□□□ -1.173e-6■■■■□ 22.2
SMARCB1-207ENST00000491967 HIST2H2ACQ16777 129 aaPredicted RBP7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 PIGGQ5H8A4 983 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 EMC4Q5J8M3 183 aa7.77□□□□□ -1.17
SMARCB1-207ENST00000491967 KHDRBS2Q5VWX1 349 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms