RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 AGAP11Q8TF27 550 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 ZNF473Q8WTR7 871 aaKnown RBP11.59□□□□□ -0.55
SREBF1-215ENST00000487401 ASB15Q8WXK1 588 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 MRRFQ96E11 262 aaKnown RBP11.59□□□□□ -0.55
SREBF1-215ENST00000487401 CSF3RQ99062 836 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 CENPKQ9BS16 269 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 MS4A8Q9BY19 250 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 IGSF5Q9NSI5 407 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 HPF1Q9NWY4 346 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 KCMF1Q9P0J7 381 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 VTI1BQ9UEU0 232 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 ACOT9Q9Y305 439 aa11.59□□□□□ -0.55
SREBF1-215ENST00000487401 A0A087X1B8 175 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 SYCE1LA8MT33 242 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 SAP18O00422 153 aaKnown RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 RTCAO00442 366 aaKnown RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 CDC40O60508 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 OR2J2O76002 312 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 TUBB4AP04350 444 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 SNRPB2P08579 225 aaKnown RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 EPB42P16452 691 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 HIST1H1TP22492 207 aaPredicted RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 PTGER1P34995 402 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 PTGS2P35354 604 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 SSR2P43308 183 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 GPR85P60893 370 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 DLG1Q12959 904 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 TRADDQ15628 312 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 FAM83EQ2M2I3 478 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 MROH9Q5TGP6 573 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 ZDHHC24Q6UX98 284 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 IL20RBQ6UXL0 311 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 C16orf47Q6ZP98 133 aaPredicted RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 MDGA2Q7Z553 956 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 CCDC91Q7Z6B0 441 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 DOLPP1Q86YN1 238 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 MYLK4Q86YV6 388 aaPredicted RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 C17orf53Q8N3J3 647 aaPredicted RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 TEX9Q8N6V9 391 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 OR5L2Q8NGL0 311 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 PTPMT1Q8WUK0 201 aaPredicted RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 SREK1Q8WXA9 508 aaKnown RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 NXNL1Q96CM4 212 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 CMTM7Q96FZ5 175 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 ATOH8Q96SQ7 321 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 MAPKAP1Q9BPZ7 522 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 OR8D2Q9GZM6 311 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 MYOTQ9UBF9 498 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 ADGRE2Q9UHX3 823 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 ZNF223Q9UK11 482 aaPredicted RBP11.58□□□□□ -0.56
SREBF1-215ENST00000487401 ASB1Q9Y576 335 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 CLDN16Q9Y5I7 305 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 CNTRLQ7Z7A1 2325 aa11.58□□□□□ -0.56
SREBF1-215ENST00000487401 A0A1B0GTH9 108 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 CCDC189A1A4V9 331 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 C17orf105B2RV13 164 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 E9PLN8 166 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 WWP2O00308 870 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 DYRK3O43781 588 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 HS6ST1O60243 411 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 PRKNO60260 465 aaPredicted RBP11.57□□□□□ -0.56
SREBF1-215ENST00000487401 CLDN14O95500 239 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 GFAPP14136 432 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 COX7A2P14406 83 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 CPN2P22792 545 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 TLX1P31314 330 aaPredicted RBP11.57□□□□□ -0.56
SREBF1-215ENST00000487401 PTGER4P35408 488 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 RAP1GDS1P52306 607 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 PLGLB1Q02325 96 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 ID2Q02363 134 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 CKAP4Q07065 602 aaKnown RBP11.57□□□□□ -0.56
SREBF1-215ENST00000487401 SLAMF1Q13291 335 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 DDX39BQ13838 428 aaKnown RBP11.57□□□□□ -0.56
SREBF1-215ENST00000487401 UAP1Q16222 522 aaPredicted RBP11.57□□□□□ -0.56
SREBF1-215ENST00000487401 DEPDC1Q5TB30 811 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 KHDRBS2Q5VWX1 349 aaKnown RBP11.57□□□□□ -0.56
SREBF1-215ENST00000487401 OR4C11Q6IEV9 310 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 C3P1Q6ZMU1 363 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 ZNF793Q6ZN11 406 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 LAS2Q8IYD9 372 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 ZFP62Q8NB50 900 aaPredicted RBP11.57□□□□□ -0.56
SREBF1-215ENST00000487401 OR7G3Q8NG95 312 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 C16orf52Q8NHV5 167 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 UBTD2Q8WUN7 234 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 RGMAQ96B86 450 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 MTFMTQ96DP5 389 aaKnown RBP11.57□□□□□ -0.56
SREBF1-215ENST00000487401 PHF12Q96QT6 1004 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 VKORC1Q9BQB6 163 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 OR51B5Q9H339 312 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 COPS7AQ9UBW8 275 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 PPT2Q9UMR5 302 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
SREBF1-215ENST00000487401 NUP210LQ5VU65 1888 aa11.57□□□□□ -0.56
SREBF1-215ENST00000487401 MYO9AB2RTY4 2548 aa11.56□□□□□ -0.56
SREBF1-215ENST00000487401 TMEM200CA6NKL6 621 aa11.56□□□□□ -0.56
SREBF1-215ENST00000487401 LDB3O75112 727 aa11.56□□□□□ -0.56
SREBF1-215ENST00000487401 PDE9AO76083 593 aa11.56□□□□□ -0.56
SREBF1-215ENST00000487401 OR6B1O95007 311 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms