RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 EFTUD2Q15029 972 aaKnown RBP eCLIP12.07□□□□□ -0.482e-7■■■■■ 27.4
HDAC6-227ENST00000485102 SLC25A35Q3KQZ1 300 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 RTL6Q6ICC9 239 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 IL20RBQ6UXL0 311 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 TMIGD1Q6UXZ0 262 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 HSDL2Q6YN16 418 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 RTL4Q6ZR62 310 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 TRILQ7L0X0 811 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 TMEM200AQ86VY9 491 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 TGIF2LYQ8IUE0 185 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 FAM109AQ8N4B1 249 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 MMGT1Q8N4V1 131 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 TMEM52Q8NDY8 209 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 CHDHQ8NE62 594 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-227ENST00000485102 OR2L5Q8NG80 312 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 SMC6Q96SB8 1091 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 KRT12Q99456 494 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 FAM173AQ9BQD7 235 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 CAPS2Q9BXY5 557 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 EHD1Q9H4M9 534 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 IL1RL2Q9HB29 575 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 IKZF3Q9UKT9 509 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 FAM215AQ9Y5M1 114 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 CLCA3PQ9Y6N3 262 aa12.07□□□□□ -0.48
HDAC6-227ENST00000485102 B3GALT2O43825 422 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 H2AFYO75367 372 aaKnown RBP12.06□□□□□ -0.48
HDAC6-227ENST00000485102 ZWINTO95229 277 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 PPP2R1BP30154 601 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 HNRNPH1P31943 449 aaKnown RBP12.06□□□□□ -0.48
HDAC6-227ENST00000485102 SOX3P41225 446 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 SLC6A12P48065 614 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 HNRNPFP52597 415 aaKnown RBP12.06□□□□□ -0.48
HDAC6-227ENST00000485102 HK2P52789 917 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 PLGLB1Q02325 96 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 SLC13A2Q13183 592 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 MYBPHQ13203 477 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 MSS51Q4VC12 460 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 C16orf47Q6ZP98 133 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-227ENST00000485102 IGDCC3Q8IVU1 814 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDAC6-227ENST00000485102 CNPY4Q8N129 248 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 NKAPQ8N5F7 415 aaKnown RBP12.06□□□□□ -0.48
HDAC6-227ENST00000485102 TMEM251Q8N6I4 163 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 OR5L2Q8NGL0 311 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 OR14A16Q8NHC5 309 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 PTPMT1Q8WUK0 201 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-227ENST00000485102 KIAA1191Q96A73 305 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 SCYL1Q96KG9 808 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 SERINC2Q96SA4 455 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 ERP44Q9BS26 406 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 L2HGDHQ9H9P8 463 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 GPRC5BQ9NZH0 403 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 WHRNQ9P202 907 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 DAPP1Q9UN19 280 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 OARD1Q9Y530 152 aa12.06□□□□□ -0.48
HDAC6-227ENST00000485102 ARHGAP21Q5T5U3 1957 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 A0A0G2JNJ9 132 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 EFCAB8A8MWE9 144 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 DNALI1O14645 258 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-227ENST00000485102 ERI3O43414 337 aaKnown RBP12.05□□□□□ -0.48
HDAC6-227ENST00000485102 HCN1O60741 890 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 FAM155BO75949 473 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 TUBBP07437 444 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 GABRA1P14867 456 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 HOXB4P17483 251 aaPredicted RBP12.05□□□□□ -0.48
HDAC6-227ENST00000485102 PGGT1BP53609 377 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 LIM2P55344 173 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 ILF2Q12905 390 aaKnown RBP12.05□□□□□ -0.48
HDAC6-227ENST00000485102 BMPR2Q13873 1038 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 SLC10A1Q14973 349 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 MPEG1Q2M385 716 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 ZNF750Q32MQ0 723 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 ABHD17CQ6PCB6 329 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 OPN5Q6U736 354 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 ARSKQ6UWY0 536 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 PDIK1LQ8N165 341 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 KRT78Q8N1N4 520 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 OR5M9Q8NGP3 310 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 OR10Q1Q8NGQ4 319 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 SARAFQ96BY9 339 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 RHBDF1Q96CC6 855 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 LRRC39Q96DD0 335 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 PHACTR1Q9C0D0 580 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 REXO4Q9GZR2 422 aaKnown RBP12.05□□□□□ -0.48
HDAC6-227ENST00000485102 DNAJB12Q9NXW2 375 aaKnown RBP12.05□□□□□ -0.48
HDAC6-227ENST00000485102 Q9UFV3 132 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 EDARQ9UNE0 448 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 NINQ8N4C6 2090 aa12.05□□□□□ -0.48
HDAC6-227ENST00000485102 A0A0G2JMM0 328 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 A0A1W2PPB8 328 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 A0A1W2PRS3 328 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 FAM166BA8MTA8 275 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 KIR3DP1A8MWS1 328 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 WWP2O00308 870 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 CDC7O00311 574 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 SYT5O00445 386 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 FOSL1P15407 271 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 SAT1P21673 171 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 GGT5P36269 586 aa12.04□□□□□ -0.48
HDAC6-227ENST00000485102 MAGEA5P43359 124 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms