RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 ZNF629Q9UEG4 869 aaPredicted RBP14.87□□□□□ -0.03
DDX56-210ENST00000479440 FBXO5Q9UKT4 447 aa14.87□□□□□ -0.03
DDX56-210ENST00000479440 CLCA1A8K7I4 914 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 KIAA1324LA8MWY0 1029 aaPredicted RBP14.86□□□□□ -0.03
DDX56-210ENST00000479440 TGFBR3LH3BV60 316 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 ARHGEF9O43307 516 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 CCL3P10147 92 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 PTMSP20962 102 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 TERF1P54274 439 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 TBL3Q12788 808 aaKnown RBP14.86□□□□□ -0.03
DDX56-210ENST00000479440 RCN2Q14257 317 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 CXXC5Q7LFL8 322 aaKnown RBP14.86□□□□□ -0.03
DDX56-210ENST00000479440 LACC1Q8IV20 430 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 HSPBAP1Q96EW2 488 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 COX4I2Q96KJ9 171 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 NDNQ99608 321 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 QPCTLQ9NXS2 382 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 ZNF407Q9C0G0 2248 aa14.86□□□□□ -0.03
DDX56-210ENST00000479440 SDR42E2A6NKP2 422 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 B3GALT2O43825 422 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 HAUS5O94927 633 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 LY6G6DO95868 133 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 IL2RAP01589 272 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 ENO2P09104 434 aaPredicted RBP14.85□□□□□ -0.03
DDX56-210ENST00000479440 MLNP12872 115 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 CD53P19397 219 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 HPDP32754 393 aaPredicted RBP14.85□□□□□ -0.03
DDX56-210ENST00000479440 HNRNPFP52597 415 aaKnown RBP14.85□□□□□ -0.03
DDX56-210ENST00000479440 RNF4P78317 190 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 SIX1Q15475 284 aaPredicted RBP14.85□□□□□ -0.03
DDX56-210ENST00000479440 ACSF3Q4G176 576 aaPredicted RBP14.85□□□□□ -0.03
DDX56-210ENST00000479440 SEM1Q6ZVN7 128 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 CLNKQ7Z7G1 428 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 NAXEQ8NCW5 288 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 SIMC1Q8NDZ2 872 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 TTLQ8NG68 377 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 GABPB2Q8TAK5 448 aaPredicted RBP14.85□□□□□ -0.03
DDX56-210ENST00000479440 NEIL3Q8TAT5 605 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 MAIP1Q8WWC4 291 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 OR8D2Q9GZM6 311 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 COPS7AQ9UBW8 275 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 CLDN16Q9Y5I7 305 aa14.85□□□□□ -0.03
DDX56-210ENST00000479440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.84□□□□□ -0.03
DDX56-210ENST00000479440 CTAGE15A4D2H0 777 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 AHRRA9YTQ3 701 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 ERI3O43414 337 aaKnown RBP14.84□□□□□ -0.03
DDX56-210ENST00000479440 GUCA1CO95843 209 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 GSTM2P28161 218 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 PCSK6P29122 969 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 CEACAM8P31997 349 aaPredicted RBP14.84□□□□□ -0.03
DDX56-210ENST00000479440 TIMP3P35625 211 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 MAGEA6P43360 314 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 KCNJ2P63252 427 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 PPP2R2BQ00005 443 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 RUNX2Q13950 521 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 PAQR3Q6TCH7 311 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 NXPE4Q6UWF7 544 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 CTAGE6Q86UF2 777 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 CAND1Q86VP6 1230 aaKnown RBP14.84□□□□□ -0.03
DDX56-210ENST00000479440 P3H2Q8IVL5 708 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.84□□□□□ -0.031e-6■■■■■ 92.8
DDX56-210ENST00000479440 TMEM52Q8NDY8 209 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 TNIP2Q8NFZ5 429 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 SLC22A8Q8TCC7 542 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 SREK1Q8WXA9 508 aaKnown RBP14.84□□□□□ -0.03
DDX56-210ENST00000479440 NANOS1Q8WY41 292 aaKnown RBP14.84□□□□□ -0.03
DDX56-210ENST00000479440 CAPZA3Q96KX2 299 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 SLC6A15Q9H2J7 730 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 XAB2Q9HCS7 855 aaKnown RBP14.84□□□□□ -0.03
DDX56-210ENST00000479440 ZFP64Q9NPA5 681 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 ACKR4Q9NPB9 350 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 KCNE2Q9Y6J6 123 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 AKAP6Q13023 2319 aa14.84□□□□□ -0.03
DDX56-210ENST00000479440 NSD1Q96L73 2696 aaPredicted RBP14.83□□□□□ -0.03
DDX56-210ENST00000479440 A0A0G2JN53 185 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 EEF1E1-BLOC1S5C9J1V9 151 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 CES2O00748 559 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 EEF1E1O43324 174 aaKnown RBP14.83□□□□□ -0.04
DDX56-210ENST00000479440 EPPINO95925 133 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 PIGAP37287 484 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 VPS41P49754 854 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 IL2P60568 153 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 STX4Q12846 297 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 PDAP1Q13442 181 aaKnown RBP14.83□□□□□ -0.04
DDX56-210ENST00000479440 SERTAD2Q14140 314 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 EFTUD2Q15029 972 aaKnown RBP eCLIP14.83□□□□□ -0.043e-8■■■■□ 25.3
DDX56-210ENST00000479440 SF3B4Q15427 424 aaKnown RBP eCLIP14.83□□□□□ -0.042e-8■■■■■ 39.9
DDX56-210ENST00000479440 MPEG1Q2M385 716 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 Q5PR19 223 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 SLC22A10Q63ZE4 541 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 THOC6Q86W42 341 aaKnown RBP14.83□□□□□ -0.04
DDX56-210ENST00000479440 KLHDC8AQ8IYD2 350 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 PM20D2Q8IYS1 436 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 LRRC25Q8N386 305 aaPredicted RBP14.83□□□□□ -0.04
DDX56-210ENST00000479440 RNF10Q8N5U6 811 aaKnown RBP14.83□□□□□ -0.04
DDX56-210ENST00000479440 SLC2A12Q8TD20 617 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 CCT6BQ92526 530 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 RUNDC3BQ96NL0 473 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 AICDAQ9GZX7 198 aa14.83□□□□□ -0.04
DDX56-210ENST00000479440 COPS7BQ9H9Q2 264 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms