RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SMU1Q2TAY7 513 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 CCDC184Q52MB2 194 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 TCTEX1D4Q5JR98 221 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 SNRNP48Q6IEG0 339 aaKnown RBP2.69□□□□□ -1.98
TARDBP-208ENST00000477447 TMEM270Q6UE05 265 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 SLC25A42Q86VD7 318 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 CACUL1Q86Y37 369 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 POM121L12Q8N7R1 296 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 TRPV3Q8NET8 790 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 OR6F1Q8NGZ6 308 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 C8orf46Q8TAG6 207 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 GANCQ8TET4 914 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 FAM46BQ96A09 425 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 EPSTI1Q96J88 318 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 ALKBH3Q96Q83 286 aaPredicted RBP2.69□□□□□ -1.98
TARDBP-208ENST00000477447 TAAR6Q96RI8 345 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 PYGO2Q9BRQ0 406 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 SLC5A7Q9GZV3 580 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 LIME1Q9H400 295 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 GNB4Q9HAV0 340 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 FAM212BQ9NTI7 297 aaPredicted RBP2.69□□□□□ -1.98
TARDBP-208ENST00000477447 DEPPQ9NTK1 212 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 ARGLU1Q9NWB6 273 aaPredicted RBP2.69□□□□□ -1.98
TARDBP-208ENST00000477447 PLEK2Q9NYT0 353 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 SPG21Q9NZD8 308 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 STX8Q9UNK0 236 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 OR1A2Q9Y585 309 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 AUP1Q9Y679 476 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 STYXL1Q9Y6J8 313 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 PCNX3Q9H6A9 2034 aa2.69□□□□□ -1.98
TARDBP-208ENST00000477447 ATP6AP2A0A1C7CYW4 349 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 LOC390937A0A1W2PQ73 354 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 TMEM129A0AVI4 362 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 OR5H15A6NDH6 313 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 SLC15A5A6NIM6 579 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 K7EQG2 157 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 CACNB4O00305 520 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 FBP2O00757 339 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 OGTO15294 1046 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 FMO6PO60774 539 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 HOXD4P09016 255 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 NUDT17P0C025 328 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 VCLP18206 1134 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 GATA2P23769 480 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 FHITP49789 147 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 TNFSF10P50591 281 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 RIDAP52758 137 aaKnown RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 NME5P56597 212 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 KCNK10P57789 538 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 DSCR10P59022 87 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 RPS27AP62979 156 aaKnown RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 ITPK1Q13572 414 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 STXBP2Q15833 593 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 FUT11Q495W5 492 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 MUC21Q5SSG8 566 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 TEX35Q5T0J7 233 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 KCTD11Q693B1 232 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 IYDQ6PHW0 289 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 CYP4V2Q6ZWL3 525 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 TIPARPQ7Z3E1 657 aaKnown RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 TBC1D10CQ8IV04 446 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 LAX1Q8IWV1 398 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 BANPQ8N9N5 519 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 PRCCQ92733 491 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 PTP4A1Q93096 173 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 NABP1Q96AH0 204 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 ANKRD27Q96NW4 1050 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 DDX50Q9BQ39 737 aaKnown RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 CCDC28BQ9BUN5 200 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 PUS3Q9BZE2 481 aaKnown RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 ALDH8A1Q9H2A2 487 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 ADNPQ9H2P0 1102 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 SP140LQ9H930 580 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 AKIRIN1Q9H9L7 192 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 CWC25Q9NXE8 425 aaPredicted RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 FBXW2Q9UKT8 454 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 ZNF346Q9UL40 294 aaKnown RBP2.68□□□□□ -1.98
TARDBP-208ENST00000477447 ERVK-19Q9WJR5 959 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 KCNK6Q9Y257 313 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 CSAG2Q9Y5P2 127 aa2.68□□□□□ -1.98
TARDBP-208ENST00000477447 TRBV5-4A0A0C4DH59 114 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 A0A1W2PRV1 198 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 IGLON5A6NGN9 336 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 ANXA9O76027 345 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 STBD1O95210 358 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 CHRNGP07510 517 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 IL4RP24394 825 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 LMO2P25791 158 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 ID1P41134 155 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 KHKP50053 298 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 SMSP52788 366 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 ACY1Q03154 408 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 ZFP36L1Q07352 338 aaKnown RBP2.67□□□□□ -1.98
TARDBP-208ENST00000477447 SLC39A12Q504Y0 691 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 CAPN13Q6MZZ7 669 aaPredicted RBP2.67□□□□□ -1.98
TARDBP-208ENST00000477447 P2RY8Q86VZ1 359 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 PHC2Q8IXK0 858 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 C10orf53Q8N6V4 93 aa2.67□□□□□ -1.98
TARDBP-208ENST00000477447 LPCAT1Q8NF37 534 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms