RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PPP3R2Q96LZ3 170 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 BCL2L14Q9BZR8 327 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 MMP28Q9H239 520 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 IL23AQ9NPF7 189 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 B3GNT2Q9NY97 397 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 NPAP1Q9NZP6 1156 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 EDARQ9UNE0 448 aa11.83□□□□□ -0.52
USP11-206ENST00000469080 RALGAPA2Q2PPJ7 1873 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 SMLR1H3BR10 107 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 TPST2O60704 377 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 SERPINA1P01009 418 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 CXCL10P02778 98 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 ANXA4P09525 319 aaPredicted RBP11.82□□□□□ -0.52
USP11-206ENST00000469080 GDI1P31150 447 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 SHMT2P34897 504 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 IL5RAQ01344 420 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 TAB1Q15750 504 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 SPATS1Q496A3 300 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 TPRG1LQ5T0D9 272 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 ARTNQ5T4W7 220 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 UBE2J2Q8N2K1 259 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 ZNF557Q8N988 423 aaPredicted RBP11.82□□□□□ -0.52
USP11-206ENST00000469080 ATG16L2Q8NAA4 619 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 GPR150Q8NGU9 434 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 COL26A1Q96A83 441 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 ZNF416Q9BWM5 594 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 YTHDF1Q9BYJ9 559 aaKnown RBP11.82□□□□□ -0.52
USP11-206ENST00000469080 AIG1Q9NVV5 245 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 PAK1IP1Q9NWT1 392 aaPredicted RBP11.82□□□□□ -0.52
USP11-206ENST00000469080 C1orf109Q9NX04 203 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 CA5BQ9Y2D0 317 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 GPR45Q9Y5Y3 372 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 FEZF1A0PJY2 475 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 ZNF99A8MXY4 864 aaPredicted RBP11.82□□□□□ -0.52
USP11-206ENST00000469080 F8W036 122 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 ERAL1O75616 437 aaKnown RBP11.82□□□□□ -0.52
USP11-206ENST00000469080 POP7O75817 140 aaKnown RBP11.82□□□□□ -0.52
USP11-206ENST00000469080 PLATP00750 562 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 B4GALNT1Q00973 533 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 SGCAQ16586 387 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 SPDYE7PQ495Y7 208 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 CYBRD1Q53TN4 286 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 AGTRAPQ6RW13 159 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 PARS2Q7L3T8 475 aaKnown RBP11.82□□□□□ -0.52
USP11-206ENST00000469080 ZFAND1Q8TCF1 268 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 SPPL3Q8TCT6 385 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 CXorf40AQ8TE69 158 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 ALG14Q96F25 216 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 YIPF4Q9BSR8 244 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 HTATIP2Q9BUP3 242 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 RHBGQ9H310 441 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 IKZF5Q9H5V7 419 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 SLC23A1Q9UHI7 598 aa11.82□□□□□ -0.52
USP11-206ENST00000469080 TDRD6O60522 2096 aaKnown RBP11.82□□□□□ -0.52
USP11-206ENST00000469080 PTPRZ1P23471 2315 aaPredicted RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 MAGEB17A8MXT2 336 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 WNT9AO14904 365 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 CAPN5O15484 640 aaPredicted RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 F8A1P23610 371 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 OR1E2P47887 323 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 PUDPQ08623 228 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 ZNF124Q15973 351 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 MEP1AQ16819 746 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 FAM98BQ52LJ0 330 aaKnown RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 ZNF542PQ5EBM4 170 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 HTR3DQ70Z44 454 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 PACRGLQ8N7B6 248 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 PHF10Q8WUB8 498 aaKnown RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 SLC9A6Q92581 669 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 CHFRQ96EP1 664 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 RNF170Q96K19 258 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 ERVK13-1Q9NX77 482 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 SLC39A1Q9NY26 324 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 PCDHGA9Q9Y5G4 932 aaKnown RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 OR51B4Q9Y5P0 310 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 A0A1W2PP55 124 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 AGAP5A6NIR3 686 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 HEPACAM2A8MVW5 462 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 GREM1O60565 184 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 CTSLP07711 333 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 CHI3L1P36222 383 aaPredicted RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 PRMT2P55345 433 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 HSD17B7P56937 341 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 RPS13P62277 151 aaKnown RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 RPS26P62854 115 aaKnown RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 S100A12P80511 92 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 ZNF404Q494X3 552 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 PDE12Q6L8Q7 609 aaKnown RBP11.81□□□□□ -0.52
USP11-206ENST00000469080 VTCN1Q7Z7D3 282 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 DTWD1Q8N5C7 304 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 PARP16Q8N5Y8 322 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 DEFB119Q8N690 84 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 SLC7A6Q92536 515 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 SAMD11Q96NU1 681 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 SLC32A1Q9H598 525 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 CACNA1EQ15878 2313 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 IGLON5A6NGN9 336 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 ST8SIA5O15466 376 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 ADAM11O75078 769 aa11.81□□□□□ -0.52
USP11-206ENST00000469080 FTH1P02794 183 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms