RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 CAMKVQ8NCB2 501 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 Q8NFD4 153 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 LINC01006Q8NI28 216 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 MRPS27Q92552 414 aaKnown RBP1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 SIPA1Q96FS4 1042 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 RMDN2Q96LZ7 410 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF558Q96NG5 402 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 GBP5Q96PP8 586 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 HSD17B14Q9BPX1 270 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 PLEKHA3Q9HB20 300 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 WDR35Q9P2L0 1181 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 RSPH14Q9UHP6 348 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 CCL27Q9Y4X3 112 aa1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 ZFP37Q9Y6Q3 630 aaPredicted RBP1.92□□□□□ -2.1
GTF3C3-209ENST00000466862 RPGRIP1LQ68CZ1 1315 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 TRAV18A0A075B6X5 111 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF487B1APH4 448 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF732B4DXR9 585 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 TMEM150CB9EJG8 249 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 PANO1I0J062 215 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 PSMA7O14818 248 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 DIAPH2O60879 1101 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 SLU7O95391 586 aaKnown RBP1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 FGF19O95750 216 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 P0C879 139 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 IFNAR1P17181 557 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 ATP5DP30049 168 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 GP5P40197 560 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 MDH2P40926 338 aaKnown RBP1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 PEX3P56589 373 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 CNTN1Q12860 1018 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 MAPK11Q15759 364 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 CDC37Q16543 378 aaPredicted RBP1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 PLPP4Q5VZY2 271 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 CST9LP1Q5W188 147 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 WSCD1Q658N2 575 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 SHQ1Q6PI26 577 aaKnown RBP1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 DCLRE1AQ6PJP8 1040 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 CCDC91Q7Z6B0 441 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 METTL23Q86XA0 190 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 UBQLNLQ8IYU4 475 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF713Q8N859 430 aaPredicted RBP1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 GOT1L1Q8NHS2 421 aaPredicted RBP1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 KIF18AQ8NI77 898 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF564Q8TBZ8 553 aaPredicted RBP1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 SLC26A7Q8TE54 656 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 AFAP1L1Q8TED9 768 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 DEPDC1BQ8WUY9 529 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 ZNF799Q96GE5 643 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 FER1L6-AS2Q96M78 137 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 RAB3IPQ96QF0 476 aaPredicted RBP1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 SDHCQ99643 169 aaPredicted RBP1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 SNX25Q9H3E2 840 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 SP140LQ9H930 580 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 NMUR1Q9HB89 426 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 PFDN4Q9NQP4 134 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 CLEC4EQ9ULY5 219 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 LIPGQ9Y5X9 500 aa1.91□□□□□ -2.1
GTF3C3-209ENST00000466862 A0A1W2PPW3 197 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 ARHGEF37A1IGU5 675 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 NPIPA3F8WFD2 350 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 P2RX6O15547 441 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC7A4O43246 635 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 RHBDL1O75783 438 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 KRT3P12035 628 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 EEF2P13639 858 aaKnown RBP1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 ERCC2P18074 760 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 PTAFRP25105 342 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 RPL9P32969 192 aaKnown RBP1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 HSPA4P34932 840 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC1A6P48664 564 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 NPY4RP50391 375 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 ADARP55265 1226 aaKnown RBP1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 KRTAP10-10P60014 251 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 CKAP4Q07065 602 aaKnown RBP1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 PPA1Q15181 289 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 RFTN2Q52LD8 501 aaPredicted RBP1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC10A5Q5PT55 438 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 REP15Q6BDI9 236 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 TRAT1Q6PIZ9 186 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 CCDC71Q8IV32 467 aaPredicted RBP1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 MFN1Q8IWA4 741 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 CCDC170Q8IYT3 715 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 NUP93Q8N1F7 819 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 CHCHD4Q8N4Q1 142 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 ZNF781Q8N8C0 355 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 MSANTD4Q8NCY6 345 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 SETD6Q8TBK2 473 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 SMPDL3AQ92484 453 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 FAM162AQ96A26 154 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 CITED2Q99967 270 aaPredicted RBP1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 NAA11Q9BSU3 229 aaPredicted RBP1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 DESI2Q9BSY9 194 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 KATNB1Q9BVA0 655 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 C2orf40Q9H1Z8 148 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 UBQLN3Q9H347 655 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 C10orf88Q9H8K7 445 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 MTRRQ9UBK8 725 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 MGAT4AQ9UM21 535 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 MOKQ9UQ07 419 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms