RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RTCAO00442 366 aaKnown RBP16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 NME4O00746 187 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 PLPP1O14494 284 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 PLD2O14939 933 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 SEC22BO75396 215 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 STAMBPO95630 424 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 B3GALT4O96024 378 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 SLC6A2P23975 617 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 ETV5P41161 510 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 EMP3P54852 163 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 RAB8AP61006 207 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 RHDQ02161 417 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 NFYCQ13952 458 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 GARNL3Q5VVW2 1013 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 PWWP2BQ6NUJ5 590 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 PPP1R3BQ86XI6 285 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 METTL4Q8N3J2 472 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 SRFBP1Q8NEF9 429 aaKnown RBP16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 WDR36Q8NI36 951 aaKnown RBP16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 ZCCHC10Q8TBK6 192 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 GAL3ST3Q96A11 431 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 RGMAQ96B86 450 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 C11orf24Q96F05 449 aaPredicted RBP16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 C17orf62Q9BQA9 187 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 CENPKQ9BS16 269 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 SORBS1Q9BX66 1292 aaKnown RBP16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 ZNF717Q9BY31 904 aaPredicted RBP16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 PRDM7Q9NQW5 492 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 SLC39A1Q9NY26 324 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 TMED5Q9Y3A6 229 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 POLR3HQ9Y535 204 aaPredicted RBP16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 PCDHA9Q9Y5H5 950 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 ADAMTS20P59510 1910 aa16.04■□□□□ 0.16
EXOSC3-203ENST00000465229 A0A0G2JN53 185 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 PRSS51A0A1B0GVH4 220 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 TCRBV3S1A0A5B6 114 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 ZNF749O43361 778 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 TIAF1O95411 115 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 ALOX12P18054 663 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 BSGP35613 385 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 RPL38P63173 70 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 MRPS22P82650 360 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 FAM214AQ32MH5 1076 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 C6orf10Q5SRN2 563 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 OR4C11Q6IEV9 310 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 ABHD13Q7L211 337 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 GALNT15Q8N3T1 639 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 DTWD1Q8N5C7 304 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 C1orf52Q8N6N3 182 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 TTC29Q8NA56 475 aaPredicted RBP16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 PMEPA1Q969W9 287 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 VPS33AQ96AX1 596 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 METTL2AQ96IZ6 378 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 KCNC2Q96PR1 638 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 TEFMQ96QE5 360 aaKnown RBP16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 ZBTB18Q99592 522 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 KLHL4Q9C0H6 718 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 CUTCQ9NTM9 273 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 AHSPQ9NZD4 102 aa16.03■□□□□ 0.16
EXOSC3-203ENST00000465229 DNAJA2O60884 412 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 CAPNS1P04632 268 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 RPSAP08865 295 aaKnown RBP16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 JMJD7P0C870 316 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 TCN1P20061 433 aaPredicted RBP16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 MSX2P35548 267 aaPredicted RBP16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 GTF2A1P52655 376 aaPredicted RBP16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 ARFIP1P53367 373 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 EEFSECP57772 596 aaKnown RBP16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 BTN3A2P78410 334 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 TGM3Q08188 693 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 ACSM2AQ08AH3 577 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 FAM53BQ14153 422 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 NDUFA9Q16795 377 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 DEFB134Q4QY38 66 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 PAGE3Q5JUK9 113 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 ACSM2BQ68CK6 577 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 TRIM40Q6P9F5 258 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 PRSS41Q7RTY9 318 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 COMMD6Q7Z4G1 85 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 SPATA24Q86W54 205 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 AMER3Q8N944 861 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 FAM156AQ8NDB6 213 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 TMEM125Q96AQ2 219 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 QRFPRQ96P65 431 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 SLC39A3Q9BRY0 314 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 TBCDQ9BTW9 1192 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 TRIM15Q9C019 465 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 CMTM6Q9NX76 183 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 PISDQ9UG56 409 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 SATB2Q9UPW6 733 aa16.02■□□□□ 0.16
EXOSC3-203ENST00000465229 AQP12BA6NM10 295 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 C9JVG2 144 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 FOXS1O43638 330 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 SCRG1O75711 98 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 PRPS2P11908 318 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 IL1RNP18510 177 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 MAPK1P28482 360 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 MAPK10P53779 464 aa16.01■□□□□ 0.15
EXOSC3-203ENST00000465229 RAE1P78406 368 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms