RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CRABP1P29762 137 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MIPP30301 263 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CCKARP32238 428 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TNFSF8P32971 234 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 XKP51811 444 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 HSD17B7P56937 341 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ACTA2P62736 377 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ACTG2P63267 376 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC7A9P82251 487 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PRR5P85299 388 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 NFKB2Q00653 900 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC6A3Q01959 620 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF33AQ06730 810 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MAP4K2Q12851 820 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 KCNC3Q14003 757 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ARHGEF7Q14155 803 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 DOC2AQ14183 400 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MEF2DQ14814 521 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 IRF4Q15306 451 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RSU1Q15404 277 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF124Q15973 351 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GUK1Q16774 197 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MICAQ29983 383 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM31Q5JXX7 168 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 THEM4Q5T1C6 240 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 KIAA0930Q6ICG6 404 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF783Q6ZMS7 281 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 NRARPQ7Z6K4 114 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PXKQ7Z7A4 578 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PTRH1Q86Y79 214 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 PHTF2Q8N3S3 785 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF527Q8NB42 609 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GPR26Q8NDV2 337 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ATP6V1C2Q8NEY4 427 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 OR51D1Q8NGF3 324 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 NPRL2Q8WTW4 380 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SMIM12Q96EX1 92 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CMTM3Q96MX0 182 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PANX1Q96RD7 426 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GPR22Q99680 433 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 STRA6Q9BX79 667 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CACNG6Q9BXT2 260 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MFFQ9GZY8 342 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ALX4Q9H161 411 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 MMP28Q9H239 520 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GAL3ST2Q9H3Q3 398 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ASAH2Q9NR71 780 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TLR8Q9NR97 1041 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 FAM217BQ9NTX9 383 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 PRMT7Q9NVM4 692 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 FAM120CQ9NX05 1096 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 BABAM2Q9NXR7 383 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 NKIRAS2Q9NYR9 191 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CPNE7Q9UBL6 633 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC27A6Q9Y2P4 619 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 FAM96BQ9Y3D0 163 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PCDHB1Q9Y5F3 818 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PCDHGA5Q9Y5G8 931 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PLCH1Q4KWH8 1693 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 A0A087WZ62 844 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 A0A0A6YYJ9 748 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CPED1A4D0V7 1026 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 OR6C74A6NCV1 312 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 USP17L4A6NCW7 530 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 C5orf51A6NDU8 294 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 UNC119BA6NIH7 251 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TMEM200CA6NKL6 621 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 RIIAD1A6NNX1 92 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 USP17L5A8MUK1 530 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 A8MX80 341 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 E7EQ34 232 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 H3BUI4 141 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CLIC1O00299 241 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 QSOX1O00391 747 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GOSR2O14653 212 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC37A4O43826 429 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 KERAO60938 352 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 POP7O75817 140 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 GLUD1P00367 558 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 HBE1P02100 147 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 TACSTD2P09758 323 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 USP17L8P0C7I0 530 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CETPP11597 493 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CD34P28906 385 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 SLC1A2P43004 574 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CLCN4P51793 760 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 PRKXP51817 358 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 AFF3P51826 1226 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 VSX2P58304 361 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 ZNF280AP59817 542 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 RPL38P63173 70 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 UBE2IP63279 158 aaKnown RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 NHLH2Q02577 135 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 MLLT1Q03111 559 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 PTPN11Q06124 597 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 RBBP4Q09028 425 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 ST3GAL4Q11206 333 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 CAMK2GQ13555 558 aaPredicted RBP2.12□□□□□ -2.07
USP53-202ENST00000450251 SPHARQ15513 63 aa2.12□□□□□ -2.07
USP53-202ENST00000450251 GPR68Q15743 365 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms