RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 ACTA2P62736 377 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 ACTG2P63267 376 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 SIM2Q14190 667 aaPredicted RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 PLEKHN1Q494U1 663 aaPredicted RBP11.28□□□□□ -0.6
FN1-212ENST00000446046 ALG10BQ5I7T1 473 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 IDNKQ5T6J7 187 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 PRAMEF17Q5VTA0 474 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 JAGN1Q8N5M9 183 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 BBS10Q8TAM1 723 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 DNAJB4Q9UDY4 337 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 GABRA3P34903 492 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 OR52E8Q6IFG1 317 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 ZNF615Q8N8J6 731 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 MAPKAP1Q9BPZ7 522 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 PPM1HQ9ULR3 514 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 MGAT4BQ9UQ53 548 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 DLGAP4Q9Y2H0 992 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 CDH10Q9Y6N8 788 aa11.28□□□□□ -0.6
FN1-212ENST00000446046 EMC8O43402 210 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 RAD51DO75771 328 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 ADRB3P13945 408 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 POU2F1P14859 743 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 CHRNA4P43681 627 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 ZNF33BQ06732 778 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 MORN1Q5T089 497 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 ANKRD22Q5VYY1 191 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 AQP11Q8NBQ7 271 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 GAL3ST3Q96A11 431 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 AMDHD1Q96NU7 426 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 ZNF559Q9BR84 538 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 YTHDF1Q9BYJ9 559 aaKnown RBP11.27□□□□□ -0.6
FN1-212ENST00000446046 RBBP6Q7Z6E9 1792 aaKnown RBP11.27□□□□□ -0.6
FN1-212ENST00000446046 PHYHO14832 338 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 RABGGTBP53611 331 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 SH3PXD2AQ5TCZ1 1133 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 NUP43Q8NFH3 380 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 B4GALT6Q9UBX8 382 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 PAPPA2Q9BXP8 1791 aa11.27□□□□□ -0.6
FN1-212ENST00000446046 KIR2DS5A0A0G2JLQ3 304 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 A0A0G2JNG1 304 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 A0A1W2PRQ8 180 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 C5orf51A6NDU8 294 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 FAM159BA6NKW6 160 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 KIR2DS3K7RE56 304 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 WNT7AO00755 349 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 NOBOXO60393 691 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 CLPXO76031 633 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 STC2O76061 302 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 SPINT3P49223 89 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 GALK1P51570 392 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 KIR2DS5Q14953 304 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 FBXO48Q5FWF7 155 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 CATSPEREQ5SY80 951 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 ZNF782Q6ZMW2 699 aaPredicted RBP11.27□□□□□ -0.61
FN1-212ENST00000446046 SLC5A8Q8N695 610 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 NFKBIDQ8NI38 313 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 USB1Q9BQ65 265 aaKnown RBP11.27□□□□□ -0.61
FN1-212ENST00000446046 GNG8Q9UK08 70 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 AHCYL1O43865 530 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 C1GALT1C1LP0DN25 315 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 DLX2Q07687 328 aaPredicted RBP11.27□□□□□ -0.61
FN1-212ENST00000446046 SUSD1Q6UWL2 747 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 ABHD5Q8WTS1 349 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 TP53INP1Q96A56 240 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 ASB9Q96DX5 294 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 IMP4Q96G21 291 aaKnown RBP11.27□□□□□ -0.61
FN1-212ENST00000446046 CASD1Q96PB1 797 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 CDK15Q96Q40 435 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 LMAN1LQ9HAT1 526 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 BRD7Q9NPI1 651 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 ACTR3BQ9P1U1 418 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 LOC730098B7Z3J9 87 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 UBL4AP11441 157 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 ITGB7P26010 798 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 YAP1P46937 504 aaKnown RBP11.27□□□□□ -0.61
FN1-212ENST00000446046 ZSWIM9Q86XI8 627 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 LGI4Q8N135 537 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 OR4F6Q8NGB9 312 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 SLC35B2Q8TB61 432 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 SPTSSAQ969W0 71 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 ZNF358Q9NW07 568 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 FOXE1O00358 373 aaPredicted RBP11.27□□□□□ -0.61
FN1-212ENST00000446046 CDC40O60508 579 aaKnown RBP eCLIP11.27□□□□□ -0.61
FN1-212ENST00000446046 PTHP01270 115 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 GANABQ14697 944 aaKnown RBP11.27□□□□□ -0.61
FN1-212ENST00000446046 TMEM201Q5SNT2 666 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 ZNF572Q7Z3I7 529 aaPredicted RBP11.27□□□□□ -0.61
FN1-212ENST00000446046 CBR4Q8N4T8 237 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 ZNF611Q8N823 705 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 HOXB13Q92826 284 aaPredicted RBP11.27□□□□□ -0.61
FN1-212ENST00000446046 GMLQ99445 158 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 MROQ9BYG7 248 aa11.27□□□□□ -0.61
FN1-212ENST00000446046 EFCAB7A8K855 629 aa11.26□□□□□ -0.61
FN1-212ENST00000446046 H7BY64 318 aa11.26□□□□□ -0.61
FN1-212ENST00000446046 SLC22A1O15245 554 aa11.26□□□□□ -0.61
FN1-212ENST00000446046 SLC6A8P48029 635 aa11.26□□□□□ -0.61
FN1-212ENST00000446046 CDKL1Q00532 357 aa11.26□□□□□ -0.61
FN1-212ENST00000446046 QPCTQ16769 361 aa11.26□□□□□ -0.61
FN1-212ENST00000446046 MEDAGQ5VYS4 303 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms