RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 NBPF19A0A087WUL8 3843 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 A1L4Q6 167 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 B4GALT2O60909 372 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 KERAO60938 352 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 SMIM24O75264 130 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 WDPCPO95876 746 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 B3GALT4O96024 378 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 FHP07954 510 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 MYL2P10916 166 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 NEFHP12036 1026 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 CREB1P16220 341 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 EFNA3P52797 238 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 CDKL1Q00532 357 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 TGFBIQ15582 683 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 TECRLQ5HYJ1 363 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 PLAG1Q6DJT9 500 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 ANKRD37Q7Z713 158 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 ZBTB46Q86UZ6 589 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 SHISA5Q8N114 240 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 ST6GALNAC3Q8NDV1 305 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 MGARPQ8TDB4 240 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 KIAA1191Q96A73 305 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 CCDC126Q96EE4 140 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 FAR2Q96K12 515 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 IMMP1LQ96LU5 166 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 CLUHP3Q96NS8 147 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 PAIP2Q9BPZ3 127 aaKnown RBP8.24□□□□□ -1.09
USP6NL-203ENST00000443016 SPNS1Q9H2V7 528 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 RHBGQ9H310 441 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 ALG9Q9H6U8 611 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 PELI2Q9HAT8 420 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 KCNK13Q9HB14 408 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 INTS9Q9NV88 658 aaKnown RBP8.24□□□□□ -1.09
USP6NL-203ENST00000443016 WWOXQ9NZC7 414 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 SLC5A6Q9Y289 635 aa8.24□□□□□ -1.09
USP6NL-203ENST00000443016 CYSRT1A8MQ03 144 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 CHST10O43529 356 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 PLIN3O60664 434 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 NAT1P18440 290 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 EXT1Q16394 746 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 C4orf17Q53FE4 359 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 SFT2D3Q587I9 215 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 FCRLBQ6BAA4 426 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 MRM1Q6IN84 353 aaKnown RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 MZT2AQ6P582 158 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 PAPD4Q6PIY7 484 aaKnown RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 GPSM1Q86YR5 675 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 TRIM42Q8IWZ5 723 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 PLD6Q8N2A8 252 aaKnown RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 AMER2Q8N7J2 671 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 ANKRD53Q8N9V6 530 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 ARMC2Q8NEN0 867 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 RHBDF1Q96CC6 855 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 PTCHD1Q96NR3 888 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 KCNK17Q96T54 332 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 BARD1Q99728 777 aaKnown RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 CD274Q9NZQ7 290 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 TMEM216Q9P0N5 145 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 ABI3Q9P2A4 366 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 PLEKHB1Q9UF11 243 aaPredicted RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 ERRFI1Q9UJM3 462 aaPredicted RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 CELSR2Q9HCU4 2923 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 ITPR2Q14571 2701 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 ZGRF1Q86YA3 2104 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 OR5H15A6NDH6 313 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 MAGEB17A8MXT2 336 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 SUPT3HB4E1H0 165 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 SUPT3HO75486 399 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 DDAH2O95865 285 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 F12P00748 615 aaPredicted RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 PROCP04070 461 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 EDN3P14138 238 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 CHN1P15882 459 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 OR4D2P58180 307 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 TAS2R50P59544 299 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 STXBP1P61764 594 aaKnown RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 REEP5Q00765 189 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 DLG1Q12959 904 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 C18orf21Q32NC0 220 aaPredicted RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 FBXO48Q5FWF7 155 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 ACER2Q5QJU3 275 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 LYPD8Q6UX82 237 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 TMIGD1Q6UXZ0 262 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 KRT78Q8N1N4 520 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 TCAIMQ8N3R3 496 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 PPP1R14CQ8TAE6 165 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 NT5CQ8TCD5 201 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 UTP15Q8TED0 518 aaKnown RBP8.23□□□□□ -1.09
USP6NL-203ENST00000443016 EXT2Q93063 718 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 TSLPQ969D9 159 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 ZNF354BQ96LW1 612 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 CAPS2Q9BXY5 557 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 FAM53CQ9NYF3 392 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 NUDT4Q9NZJ9 180 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 SLC17A7Q9P2U7 560 aa8.23□□□□□ -1.09
USP6NL-203ENST00000443016 ANKDD1BA6NHY2 528 aa8.22□□□□□ -1.09
USP6NL-203ENST00000443016 BIRC5O15392 142 aa8.22□□□□□ -1.09
USP6NL-203ENST00000443016 SERPINA6P08185 405 aa8.22□□□□□ -1.09
USP6NL-203ENST00000443016 C1GALT1C1LP0DN25 315 aa8.22□□□□□ -1.09
USP6NL-203ENST00000443016 GFAPP14136 432 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms