RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 SPNP16150 400 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 GTF2E2P29084 291 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 CDC42P60953 191 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 PTGES3Q15185 160 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 ZNF77Q15935 545 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 SLC5A12Q1EHB4 618 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 CYP27C1Q4G0S4 372 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 TMEM53Q6P2H8 277 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 DPPA4Q7L190 304 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 ADIPOR2Q86V24 386 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 WDR48Q8TAF3 677 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 EFCAB11Q9BUY7 163 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 LINC00597Q9H2U6 94 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 TRIM39Q9HCM9 518 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 QPCTLQ9NXS2 382 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 TAS2R9Q9NYW1 312 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 ANGPT4Q9Y264 503 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 MAP4K5Q9Y4K4 846 aa15.66■□□□□ 0.1
CLCNKA-203ENST00000439316 SPTBN5Q9NRC6 3674 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 EYSQ5T1H1 3165 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 PIPSLA2A3N6 862 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 NEDD8-MDP1E9PL57 170 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 MPZL2O60487 215 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 GADD45GO95257 159 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 MED26O95402 600 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 C1orf105O95561 183 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 RECKO95980 971 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 GBAP04062 536 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 CHI3L1P36222 383 aaPredicted RBP15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 CYP4F2P78329 520 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 C2orf80Q0P641 193 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 PRSS53Q2L4Q9 553 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 ATAD3BQ5T9A4 648 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 AKAP14Q86UN6 197 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 OR5AK3PQ8NH89 298 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 GTPBP3Q969Y2 492 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 SGPP1Q9BX95 441 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 SFXN1Q9H9B4 322 aa15.65■□□□□ 0.1
CLCNKA-203ENST00000439316 SNPHO15079 494 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 SNX4O95219 450 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 C1GALT1C1LP0DN25 315 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 NPPBP16860 134 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 RHCEP18577 417 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 PBLDP30039 288 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 TMEM115Q12893 351 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 ZNF770Q6IQ21 691 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 TMEM220Q6QAJ8 160 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 KLHL17Q6TDP4 642 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 ATCAYQ86WG3 371 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 CYP4Z2PQ8N1L4 340 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 METTL4Q8N3J2 472 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 AQP11Q8NBQ7 271 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 CHAC2Q8WUX2 184 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 MYLIPQ8WY64 445 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 MTERF3Q96E29 417 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 OR5M11Q96RB7 305 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 WRAP53Q9BUR4 548 aaKnown RBP15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 TMEM121BQ9BXQ6 578 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 KCND3Q9UK17 655 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 DYRK1BQ9Y463 629 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 PCDHGB6Q9Y5F9 930 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 NUP210Q8TEM1 1887 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 DSPPQ9NZW4 1301 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 TRBC2A0A5B9 178 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 H3BM21 787 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 ZW10O43264 779 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 KIAA0513O60268 411 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 KRT75O95678 551 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 EIF2S1P05198 315 aaKnown RBP15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 CTSLP07711 333 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 HSMCR30P0CW71 290 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 PIPP12273 146 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 POU2F1P14859 743 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 CHMP24386 653 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 PIK3CBP42338 1070 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 SLC15A1P46059 708 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 CRISP1P54107 249 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 TAS2R50P59544 299 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 DMC1Q14565 340 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 GANABQ14697 944 aaKnown RBP15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 TIMM50Q3ZCQ8 353 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 ARSIQ5FYB1 569 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 CCDC190Q86UF4 302 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 HEATR4Q86WZ0 1026 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 SLC30A8Q8IWU4 369 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 SYTL1Q8IYJ3 562 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 MGLLQ99685 303 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 TAPBPLQ9BX59 468 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 OR51B5Q9H339 312 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 GULP1Q9UBP9 304 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 MKLN1Q9UL63 735 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 CFL2Q9Y281 166 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 WNT6Q9Y6F9 365 aa15.64■□□□□ 0.09
CLCNKA-203ENST00000439316 SAP18O00422 153 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 TGFB1P01137 390 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 GSTT2P0CG29 244 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 GSTT2BP0CG30 244 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 ALOX12P18054 663 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 SOX6P35712 828 aa15.63■□□□□ 0.09
CLCNKA-203ENST00000439316 KRR1Q13601 381 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms