RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 TAF4O00268 1085 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ZW10O43264 779 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 MMP20O60882 483 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 DDX6P26196 483 aaKnown RBP eCLIP11.25□□□□□ -0.61
CD44-209ENST00000433892 SERPINB1P30740 379 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 MAGEA10P43363 369 aaPredicted RBP11.25□□□□□ -0.61
CD44-209ENST00000433892 ALDH9A1P49189 494 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 DGKGP49619 791 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 EPHA5P54756 1037 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 LIM2P55344 173 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 TEKQ02763 1124 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 DOC2BQ14184 412 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ARHGEF6Q15052 776 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 TCEAL5Q5H9L2 206 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 PRAMEF14Q5SWL7 426 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 PRAMEF13Q5VWM6 474 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 FRMPD2BQ6IN97 320 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 REEP3Q6NUK4 255 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 UNC5DQ6UXZ4 953 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 FAM83HQ6ZRV2 1179 aaPredicted RBP11.25□□□□□ -0.61
CD44-209ENST00000433892 NCCRP1Q6ZVX7 275 aaPredicted RBP11.25□□□□□ -0.61
CD44-209ENST00000433892 C12orf40Q86WS4 652 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 PARP16Q8N5Y8 322 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 POC5Q8NA72 575 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 KBTBD8Q8NFY9 601 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 OR5AR1Q8NGP9 310 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 NUS1Q96E22 293 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 MTERF3Q96E29 417 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 IL4I1Q96RQ9 567 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ZDHHC5Q9C0B5 715 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ZCCHC2Q9C0B9 1178 aaKnown RBP11.25□□□□□ -0.61
CD44-209ENST00000433892 KLHL25Q9H0H3 589 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 SLAMF7Q9NQ25 335 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 C5AR2Q9P296 337 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 FTSJ1Q9UET6 329 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ALPK3Q96L96 1907 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 TRIM43BA6NCK2 446 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ANKDD1BA6NHY2 528 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ZAR1LA6NP61 321 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 PSMD11O00231 422 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 BCHEP06276 602 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 LINC00271P0C7V0 271 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 UQCRC2P22695 453 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ACADLP28330 430 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 S100A5P33763 92 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 FEN1P39748 380 aaKnown RBP11.25□□□□□ -0.61
CD44-209ENST00000433892 LIMK1P53667 647 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 CRISP1P54107 249 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 PRMT2P55345 433 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ST8SIA6P61647 398 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 OLR1P78380 273 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 DHCR24Q15392 516 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 CARTPTQ16568 116 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 TSTQ16762 297 aaKnown RBP11.25□□□□□ -0.61
CD44-209ENST00000433892 SLC9B2Q86UD5 537 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 HEATR4Q86WZ0 1026 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 LACC1Q8IV20 430 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ADGRF3Q8IZF5 1079 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 CYP4Z2PQ8N1L4 340 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 HORMAD2Q8N7B1 307 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 HCAR2Q8TDS4 363 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 SLC38A5Q8WUX1 472 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 RAB8BQ92930 207 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 CRELD1Q96HD1 420 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 LRRC3BQ96PB8 259 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 MGLLQ99685 303 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 MAPKAP1Q9BPZ7 522 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 RSPO3Q9BXY4 272 aaPredicted RBP11.25□□□□□ -0.61
CD44-209ENST00000433892 NXF2Q9GZY0 626 aaKnown RBP11.25□□□□□ -0.61
CD44-209ENST00000433892 C11orf16Q9NQ32 467 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 SAGE1Q9NXZ1 904 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 MARK1Q9P0L2 795 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 CAB39Q9Y376 341 aaPredicted RBP11.25□□□□□ -0.61
CD44-209ENST00000433892 DNAH14Q0VDD8 3507 aa11.25□□□□□ -0.61
CD44-209ENST00000433892 ISPDA4D126 451 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 EFCAB10A6NFE3 127 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 SAGE2PA6NJ88 616 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 C5orf58C9J3I9 102 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 PLPP1O14494 284 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 PI15O43692 258 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 LZTS3O60299 673 aaPredicted RBP11.24□□□□□ -0.61
CD44-209ENST00000433892 SEMA7AO75326 666 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 SOX14O95416 240 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 TBX6O95947 436 aaPredicted RBP11.24□□□□□ -0.61
CD44-209ENST00000433892 IGFBP1P08833 259 aaPredicted RBP11.24□□□□□ -0.61
CD44-209ENST00000433892 CLTBP09497 229 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 CISD3P0C7P0 127 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 C6P13671 934 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 MAGEA8P43361 318 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 MANFP55145 182 aaKnown RBP11.24□□□□□ -0.61
CD44-209ENST00000433892 ZNF181Q2M3W8 571 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 ZNF697Q5TEC3 545 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 ZNF770Q6IQ21 691 aaPredicted RBP11.24□□□□□ -0.61
CD44-209ENST00000433892 TUBA3EQ6PEY2 450 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 IKBIPQ70UQ0 350 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 WDR36Q8NI36 951 aaKnown RBP11.24□□□□□ -0.61
CD44-209ENST00000433892 UBE2E3Q969T4 207 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 NXPE3Q969Y0 559 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 PDXPQ96GD0 296 aa11.24□□□□□ -0.61
CD44-209ENST00000433892 F2RL3Q96RI0 385 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms