RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 DNAJC27Q9NZQ0 273 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 SCAMP2O15127 329 aaKnown RBP13.7□□□□□ -0.22
MSH5-206ENST00000423982 ENTPD6O75354 484 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 OLFM2O95897 454 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 CLEC2LP0C7M8 214 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 SRCP12931 536 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
MSH5-206ENST00000423982 SPAM1P38567 509 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 DDOSTP39656 456 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 HNF4AP41235 474 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 MVDP53602 400 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 OLR1P78380 273 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 ACSM2AQ08AH3 577 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 GGTA1PQ4G0N0 100 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 ARHGAP15Q53QZ3 475 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 DGKKQ5KSL6 1271 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 CPTPQ5TA50 214 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 MFSD4BQ5TF39 518 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 ACSM2BQ68CK6 577 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 TMPRSS11AQ6ZMR5 421 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 C11orf65Q8NCR3 313 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 TAPBPLQ9BX59 468 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 LINC00597Q9H2U6 94 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 DNAJC11Q9NVH1 559 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 CLEC4EQ9ULY5 219 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 WNT6Q9Y6F9 365 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 ERVH48-1M5A8F1 160 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 TNFRSF10AO00220 468 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 GREM1O60565 184 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 HIST1H2AGP0C0S8 130 aaPredicted RBP13.7□□□□□ -0.22
MSH5-206ENST00000423982 HIST1H2ADP20671 130 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 CHMP24386 653 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 PXNP49023 591 aaPredicted RBP13.7□□□□□ -0.22
MSH5-206ENST00000423982 HBA1P69905 142 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 MC1RQ01726 317 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 BCL2L1Q07817 233 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 CCSMST1Q4G0I0 132 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 SMUG1Q53HV7 270 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 PAMR1Q6UXH9 720 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 MSANTD1Q6ZTZ1 278 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 NPAS3Q8IXF0 933 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 FAM9CQ8IZT9 166 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 UBASH3BQ8TF42 649 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 TMCO6Q96DC7 493 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 CRELD1Q96HD1 420 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 HIST1H2AHQ96KK5 128 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 HIST1H2AJQ99878 128 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 H2AFJQ9BTM1 129 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 SLC12A9Q9BXP2 914 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 ACER3Q9NUN7 267 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 TDP1Q9NUW8 608 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 NPAP1Q9NZP6 1156 aa13.7□□□□□ -0.22
MSH5-206ENST00000423982 LSM7Q9UK45 103 aaKnown RBP13.7□□□□□ -0.22
MSH5-206ENST00000423982 COLQQ9Y215 455 aaPredicted RBP13.7□□□□□ -0.22
MSH5-206ENST00000423982 PLK4O00444 970 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 CCNB2O95067 398 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 CYP17A1P05093 508 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 ANXA4P09525 319 aaPredicted RBP13.69□□□□□ -0.22
MSH5-206ENST00000423982 HNRNPA1P09651 372 aaKnown RBP eCLIP13.69□□□□□ -0.22
MSH5-206ENST00000423982 ANXA8P13928 327 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 JUPP14923 745 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 CYP2A7P20853 494 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 WEE1P30291 646 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 PCGF2P35227 344 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 TIE1P35590 1138 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 HYAL2Q12891 473 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 ABRQ12979 859 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 E2F2Q14209 437 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.69□□□□□ -0.22
MSH5-206ENST00000423982 PLAG1Q6DJT9 500 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 SLC34A3Q8N130 599 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 DEPDC4Q8N2C3 294 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 ASB11Q8WXH4 323 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 TMEM203Q969S6 136 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 CIDECQ96AQ7 238 aaPredicted RBP13.69□□□□□ -0.22
MSH5-206ENST00000423982 VPS35Q96QK1 796 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 CDCA4Q9BXL8 241 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 SRRQ9GZT4 340 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 DYRK4Q9NR20 520 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 EXO1Q9UQ84 846 aaKnown RBP13.69□□□□□ -0.22
MSH5-206ENST00000423982 MAP4K5Q9Y4K4 846 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 PLXNB3Q9ULL4 1909 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 SAP18O00422 153 aaKnown RBP13.69□□□□□ -0.22
MSH5-206ENST00000423982 PLD2O14939 933 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 CD72P21854 359 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 IDSP22304 550 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 NSG1P42857 185 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 DOC2AQ14183 400 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 EIF4HQ15056 248 aaKnown RBP13.69□□□□□ -0.22
MSH5-206ENST00000423982 IFI44LQ53G44 452 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 CHST9Q7L1S5 443 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 VN1R5Q7Z5H4 357 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 MED8Q96G25 268 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 TTYH1Q9H313 450 aaPredicted RBP13.69□□□□□ -0.22
MSH5-206ENST00000423982 ZNF556Q9HAH1 456 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 CLDND1Q9NY35 253 aa13.69□□□□□ -0.22
MSH5-206ENST00000423982 USP34Q70CQ2 3546 aa13.68□□□□□ -0.22
MSH5-206ENST00000423982 GNG14A0A1W2PPG7 69 aa13.68□□□□□ -0.22
MSH5-206ENST00000423982 CENPBD1B2RD01 187 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms