RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CTSCP53634 463 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 UCNP55089 124 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 NUP107P57740 925 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 YPEL5P62699 121 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ELOAQ14241 798 aaKnown RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 GK3PQ14409 553 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 CYP2A13Q16696 494 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 VMACQ2NL98 169 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 OTUD3Q5T2D3 398 aaPredicted RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 OR4F3Q6IEY1 312 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 GALNT18Q6P9A2 607 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ADAMTSL4Q6UY14 1074 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 SLCO4C1Q6ZQN7 724 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 TMEM26Q6ZUK4 368 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ERI1Q8IV48 349 aaKnown RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 SLC30A8Q8IWU4 369 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 LAS2Q8IYD9 372 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 OR13H1Q8NG92 308 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 OR7G3Q8NG95 312 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF420Q8TAQ5 688 aaPredicted RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 COQ8BQ96D53 544 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 QRFPRQ96P65 431 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 APOOQ9BUR5 198 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 SGPP1Q9BX95 441 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 REXO4Q9GZR2 422 aaKnown RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 WDR26Q9H7D7 661 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 CCDC177Q9NQR7 707 aaPredicted RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ADPRHL2Q9NX46 363 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 ATP6V1HQ9UI12 483 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 HEMK1Q9Y5R4 338 aaPredicted RBP12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 HSPE1-MOB4S4R3N1 261 aa12.32□□□□□ -0.44
SMARCB1-203ENST00000407082 GNG14A0A1W2PPG7 69 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 RNASET2O00584 256 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 KCNJ13O60928 360 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 POP7O75817 140 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 SLC16A8O95907 504 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 MT-CO3P00414 261 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 SOD1P00441 154 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 IFNA14P01570 189 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 HOXB9P17482 250 aaPredicted RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 PTX3P26022 381 aaPredicted RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 PBLDP30039 288 aaPredicted RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 BDKRB1P46663 353 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 PREPP48147 710 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 HLCSP50747 726 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 GABARAPL2P60520 117 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 YBX1P67809 324 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 PHC1P78364 1004 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 INSM1Q01101 510 aaPredicted RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 RBBP4Q09028 425 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF763Q0D2J5 394 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 TUBA3CQ13748 450 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 DDX39BQ13838 428 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 SHBQ15464 509 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 ZXDCQ2QGD7 858 aaPredicted RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 TMEM214Q6NUQ4 689 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 LCTLQ6UWM7 567 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 DNAJC14Q6Y2X3 702 aaPredicted RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 IKBIPQ70UQ0 350 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 EIF3MQ7L2H7 374 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 HEATR4Q86WZ0 1026 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 DCP2Q8IU60 420 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 ZDHHC21Q8IVQ6 265 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 KCNE4Q8WWG9 221 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 SLC5A11Q8WWX8 675 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 HDAC2Q92769 488 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 NMD3Q96D46 503 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 MPP4Q96JB8 637 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 LGR4Q9BXB1 951 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 TEX101Q9BY14 249 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 FAM117AQ9C073 453 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 RBM38Q9H0Z9 239 aaKnown RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 OR2AG1Q9H205 316 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 NTN4Q9HB63 628 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 SLC24A3Q9HC58 644 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 PHPT1Q9NRX4 125 aaPredicted RBP12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 TMEM9Q9P0T7 183 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 USP22Q9UPT9 525 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 V9GYQ6 96 aa12.31□□□□□ -0.44
SMARCB1-203ENST00000407082 CACNB4O00305 520 aaPredicted RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 UPK1AO00322 258 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 PCDH7O60245 1069 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 KDM1AO60341 852 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 LRATO95237 230 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 FKBP9O95302 570 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 CPSF4O95639 269 aaKnown RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 SNAP29O95721 258 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 HOXC4P09017 264 aaPredicted RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 TACR1P25103 407 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 HTR1BP28222 390 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 KDELR2P33947 212 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 SOX11P35716 441 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 MAGEA2P43356 314 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 CDK3Q00526 305 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 ILKQ13418 452 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 UGT8Q16880 541 aa12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF658BQ4V348 819 aaPredicted RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 ZNF648Q5T619 568 aaPredicted RBP12.3□□□□□ -0.44
SMARCB1-203ENST00000407082 THEMIS2Q5TEJ8 643 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms