RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 FHP07954 510 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 OR12D1P0DN82 309 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 UQCRC2P22695 453 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 TPP2P29144 1249 aaPredicted RBP8.68□□□□□ -1.02
LIG4-202ENST00000405925 KIAA1024LP59773 190 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 PTCHD4Q6ZW05 846 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 C6orf120Q7Z4R8 191 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 HMGN2P46Q86SG4 172 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 IQCHQ86VS3 1027 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 MCATQ8IVS2 390 aaKnown RBP8.68□□□□□ -1.02
LIG4-202ENST00000405925 SLC30A8Q8IWU4 369 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 IL22RA1Q8N6P7 574 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 ACOT4Q8N9L9 421 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 NUP43Q8NFH3 380 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 OR8J3Q8NGG0 315 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 OR2L8Q8NGY9 312 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 FAM174AQ8TBP5 190 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 NAT6Q93015 286 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 MRPL48Q96GC5 212 aaKnown RBP8.68□□□□□ -1.02
LIG4-202ENST00000405925 ART5Q96L15 291 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 SLC23A2Q9UGH3 650 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 HCN2Q9UL51 889 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 PLCL2Q9UPR0 1127 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.68□□□□□ -1.02
LIG4-202ENST00000405925 EME2A4GXA9 379 aaPredicted RBP8.68□□□□□ -1.02
LIG4-202ENST00000405925 MCIDASD6RGH6 385 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 CCNB2O95067 398 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 PTGER1P34995 402 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 SPRED3Q2MJR0 410 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 VMACQ2NL98 169 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 PAGE3Q5JUK9 113 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 C16orf87Q6PH81 154 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 SLCO4C1Q6ZQN7 724 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 SYT13Q7L8C5 426 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 FBXO27Q8NI29 283 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 THAP3Q8WTV1 239 aaPredicted RBP8.68□□□□□ -1.02
LIG4-202ENST00000405925 GEMIN6Q8WXD5 167 aaKnown RBP8.68□□□□□ -1.02
LIG4-202ENST00000405925 PHF21AQ96BD5 680 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 HSH2DQ96JZ2 352 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 ACTL8Q9H568 366 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 TRPV4Q9HBA0 871 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 C19orf25Q9UFG5 118 aaPredicted RBP8.68□□□□□ -1.02
LIG4-202ENST00000405925 ZNF236Q9UL36 1845 aa8.68□□□□□ -1.02
LIG4-202ENST00000405925 CXorf51AA0A1B0GTR3 108 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 UBFD1O14562 309 aaKnown RBP8.67□□□□□ -1.02
LIG4-202ENST00000405925 RGS5O15539 181 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 CER1O95813 267 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 ETFAP13804 333 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 TACR1P25103 407 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 GSTM5P46439 218 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 OR4D2P58180 307 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 MESP2Q0VG99 397 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 DECR1Q16698 335 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 CDC73Q6P1J9 531 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 FAM83HQ6ZRV2 1179 aaPredicted RBP8.67□□□□□ -1.02
LIG4-202ENST00000405925 EPHX4Q8IUS5 362 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 MFSD2AQ8NA29 543 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 PIGXQ8TBF5 258 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 EID2BQ96D98 161 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 ZDHHC5Q9C0B5 715 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 GAREM1Q9H706 876 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 EPHA6Q9UF33 1036 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 A0A1W2PPC4 97 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 BCKDKO14874 412 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 TAPBPO15533 448 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 ALDOCP09972 364 aaKnown RBP8.67□□□□□ -1.02
LIG4-202ENST00000405925 PORP16435 677 aaPredicted RBP8.67□□□□□ -1.02
LIG4-202ENST00000405925 S100A5P33763 92 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 SLC19A1P41440 591 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 ACY1Q03154 408 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 CACNA1EQ15878 2313 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 CYP27C1Q4G0S4 372 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 CYBRD1Q53TN4 286 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 CLVS1Q8IUQ0 354 aaPredicted RBP8.67□□□□□ -1.02
LIG4-202ENST00000405925 TSPAN14Q8NG11 270 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 SMPDL3BQ92485 455 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 GPATCH1Q9BRR8 931 aaKnown RBP8.67□□□□□ -1.02
LIG4-202ENST00000405925 BHLHE41Q9C0J9 482 aaPredicted RBP8.67□□□□□ -1.02
LIG4-202ENST00000405925 PNPLA3Q9NST1 481 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 NDUFA13Q9P0J0 144 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 CLEC1BQ9P126 229 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 TMEM265A0A087WTH1 108 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 LSM1O15116 133 aaKnown RBP8.67□□□□□ -1.02
LIG4-202ENST00000405925 EMC8O43402 210 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 UGT2B7P16662 529 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 GABRA3P34903 492 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 OR1E2P47887 323 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 AQP4P55087 323 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 TARDBPQ13148 414 aaKnown RBP eCLIP8.67□□□□□ -1.02
LIG4-202ENST00000405925 FADDQ13158 208 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 ENPP2Q13822 863 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 NSDHLQ15738 373 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 SNAPC1Q16533 368 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 OR2T5Q6IEZ7 315 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 GPR153Q6NV75 609 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 TMEM92Q6UXU6 159 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 MINDY1Q8N5J2 469 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 OR2L3Q8NG85 312 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 OR2T29Q8NH02 315 aa8.67□□□□□ -1.02
LIG4-202ENST00000405925 PHOSPHO1Q8TCT1 267 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms