RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 VSX2P58304 361 aaPredicted RBP12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 MLC1Q15049 377 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 ADRM1Q16186 407 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 LRRC36Q1X8D7 754 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 VMACQ2NL98 169 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 DEFB134Q4QY38 66 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 WLSQ5T9L3 541 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 C18orf63Q68DL7 685 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 TMEM214Q6NUQ4 689 aaKnown RBP12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 ERICH5Q6P6B1 374 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 FAM92BQ6ZTR7 304 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 PTOV1Q86YD1 416 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 MCATQ8IVS2 390 aaKnown RBP12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 SLC35F3Q8IY50 421 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 ZZZ3Q8IYH5 903 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 DNAJC22Q8N4W6 341 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 CSNK1A1LQ8N752 337 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 ARL10Q8N8L6 244 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 OR52N2Q8NGI0 321 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 ZCCHC10Q8TBK6 192 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 FAM110BQ8TC76 370 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 NETO1Q8TDF5 533 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 NCSTNQ92542 709 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 ZBED6CLQ96FA7 236 aaPredicted RBP12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 TCTN2Q96GX1 697 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 ZC3H10Q96K80 434 aaKnown RBP12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 CCDC3Q9BQI4 270 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 SPATA9Q9BWV2 254 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 KLHL4Q9C0H6 718 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 VCX3BQ9H321 246 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 CXorf36Q9H7Y0 433 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 GPATCH2Q9NW75 528 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 FBXO4Q9UKT5 387 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 CES1P1Q9UKY3 287 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 CABIN1Q9Y6J0 2220 aa12.59□□□□□ -0.39
CEACAM1-206ENST00000403136 B3GALT2O43825 422 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 PEX1O43933 1283 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 SRPX2O60687 465 aaPredicted RBP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 PRKRAO75569 313 aaKnown RBP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 TIPRLO75663 272 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 KRT75O95678 551 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 GLB1P16278 677 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 ZNF10P21506 573 aaPredicted RBP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 PPM1FP49593 454 aaPredicted RBP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 MVDP53602 400 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 RUNX2Q13950 521 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 OGFRL1Q5TC84 451 aaPredicted RBP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 NKAIN2Q5VXU1 208 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 SLC48A1Q6P1K1 146 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 DNAJC9Q8WXX5 260 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 FAM162AQ96A26 154 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 PPWD1Q96BP3 646 aaKnown RBP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 ZDHHC12Q96GR4 267 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 NLNQ9BYT8 704 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 CHST8Q9H2A9 424 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 EPS8L2Q9H6S3 715 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 DCAF13Q9NV06 445 aaKnown RBP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 KCMF1Q9P0J7 381 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 MRPS2Q9Y399 296 aaKnown RBP12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 SLC22A7Q9Y694 548 aa12.58□□□□□ -0.39
CEACAM1-206ENST00000403136 A0A1B0GTQ1 180 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 C9P02748 559 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 RETP07949 1114 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 IL1RNP18510 177 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 PEX2P28328 305 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 CHI3L1P36222 383 aaPredicted RBP12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 CRATP43155 626 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 GPR3P46089 330 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 OR1D5P58170 312 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 VEZF1Q14119 521 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 C16orf72Q14CZ0 275 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 ANGPTL8Q6UXH0 198 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 CEP68Q76N32 757 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 ERMP1Q7Z2K6 904 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 AMIGO2Q86SJ2 522 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 ADCY4Q8NFM4 1077 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 OR5AK3PQ8NH89 298 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 PSMA8Q8TAA3 256 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 POP5Q969H6 163 aaKnown RBP12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 NCLNQ969V3 563 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 AMDHD1Q96NU7 426 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 TGM7Q96PF1 710 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 BBS4Q96RK4 519 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 SEPHS2Q99611 448 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 DPH2Q9BQC3 489 aaPredicted RBP12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 UGT2B28Q9BY64 529 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 GLIPR2Q9H4G4 154 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 RAD21L1Q9H4I0 556 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 NEUROD4Q9HD90 331 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 STARD5Q9NSY2 213 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 PHF11Q9UIL8 331 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 PSME2Q9UL46 239 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 SNX8Q9Y5X2 465 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 NCOR1O75376 2440 aa12.58□□□□□ -0.4
CEACAM1-206ENST00000403136 IGHV1OR21-1A0A087WYE8 117 aa12.57□□□□□ -0.4
CEACAM1-206ENST00000403136 MYO1GB0I1T2 1018 aa12.57□□□□□ -0.4
CEACAM1-206ENST00000403136 TXNDC9O14530 226 aa12.57□□□□□ -0.4
CEACAM1-206ENST00000403136 B4GAT1O43505 415 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms