RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 COX6B1P14854 86 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 NME2P22392 152 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 GSTM2P28161 218 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 RFC3P40938 356 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 CA7P43166 264 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 HLCSP50747 726 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 NEK2P51955 445 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 HNRNPH2P55795 449 aaKnown RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 HSD17B7P56937 341 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 IGLV3-21P80748 117 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 ADORA2A-AS1P86434 159 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 OC90Q02509 493 aaPredicted RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 SETDB1Q15047 1291 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 TERF2Q15554 542 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 PFKFB4Q16877 469 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 WHAMMP3Q1A5X7 153 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 TECRLQ5HYJ1 363 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 DEPDC1Q5TB30 811 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 MRM1Q6IN84 353 aaKnown RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 GRHL2Q6ISB3 625 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 C8orf74Q6P047 294 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 RPS27LQ71UM5 84 aaKnown RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 OR4N5Q8IXE1 308 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 ZNF595Q8IYB9 648 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 CPSF7Q8N684 471 aaKnown RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 TEX9Q8N6V9 391 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 LRRN4CLQ8ND94 238 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 HUS1BQ8NHY5 278 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 RHEBL1Q8TAI7 183 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 UHMK1Q8TAS1 419 aaKnown RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 DCAKDQ8WVC6 231 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 CCDC120Q96HB5 630 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 FAR2Q96K12 515 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 GPR137Q96N19 417 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 NSUN5Q96P11 429 aaKnown RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 DEFB126Q9BYW3 111 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 LRFN1Q9P244 771 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 SEC14L3Q9UDX4 400 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 TINAGQ9UJW2 476 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 RNF11Q9Y3C5 154 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 ATG4BQ9Y4P1 393 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 ABCA12Q86UK0 2595 aa8.24□□□□□ -1.09
ATG4A-205ENST00000394892 TEP1Q99973 2627 aaKnown RBP8.24□□□□□ -1.09
ATG4A-205ENST00000394892 CPAMD8Q8IZJ3 1885 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 A0A087X1B8 175 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 NPIPA5E9PKD4 350 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 PLPP1O14494 284 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 OR7A17O14581 309 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 TMPRSS11DO60235 418 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 OR6B1O95007 311 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 ACSL3O95573 720 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 CRYABP02511 175 aaKnown RBP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 PCNAP12004 261 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 HIST1H1TP22492 207 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 PTGER1P34995 402 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 BSGP35613 385 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 PIK3CGP48736 1102 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 CASP6P55212 293 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 RPS13P62277 151 aaKnown RBP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 SKP1P63208 163 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 RBPJQ06330 500 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 CKAP4Q07065 602 aaKnown RBP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 SLC13A2Q13183 592 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 LAPTM5Q13571 262 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 ACAP2Q15057 778 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 PCBP2Q15366 365 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 UAP1Q16222 522 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 MAPKAPK3Q16644 382 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 KHDRBS2Q5VWX1 349 aaKnown RBP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 C18orf63Q68DL7 685 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 MED27Q6P2C8 311 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 TRIM40Q6P9F5 258 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 Q6ZPB1 254 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 GOLGA7Q7Z5G4 137 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 TBC1D1Q86TI0 1168 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 SULF2Q8IWU5 870 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 L3MBTL4Q8NA19 623 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 OR52B6Q8NGF0 335 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 WDR20Q8TBZ3 569 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 ZNF721Q8TF20 911 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 CDK15Q96Q40 435 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 MTERF1Q99551 399 aaKnown RBP8.23□□□□□ -1.09
ATG4A-205ENST00000394892 TBCDQ9BTW9 1192 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 ALOXE3Q9BYJ1 711 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 EPB41L4BQ9H329 900 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 LYRM4Q9HD34 91 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 ADAP2Q9NPF8 381 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 DMRT3Q9NQL9 472 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 OPTCQ9UBM4 332 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 VTI1BQ9UEU0 232 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 SH3BGRL2Q9UJC5 107 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 ZNF225Q9UK10 706 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 FBXW2Q9UKT8 454 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 NPIPA1Q9UND3 350 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 TSC22D4Q9Y3Q8 395 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 ASB4Q9Y574 426 aa8.23□□□□□ -1.09
ATG4A-205ENST00000394892 CRYBG3Q68DQ2 2970 aa8.22□□□□□ -1.09
ATG4A-205ENST00000394892 A0A0A6YYD5 115 aa8.22□□□□□ -1.09
ATG4A-205ENST00000394892 TRGV8A0A0C4DH27 118 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms