RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 C20orf27Q9GZN8 174 aa17.52■□□□□ 0.4
SNCB-202ENST00000393693 ZNF395Q9H8N7 513 aaPredicted RBP17.52■□□□□ 0.4
SNCB-202ENST00000393693 PARVBQ9HBI1 364 aa17.52■□□□□ 0.4
SNCB-202ENST00000393693 UTP6Q9NYH9 597 aaKnown RBP17.52■□□□□ 0.4
SNCB-202ENST00000393693 HCN3Q9P1Z3 774 aa17.52■□□□□ 0.4
SNCB-202ENST00000393693 VTI1BQ9UEU0 232 aa17.52■□□□□ 0.4
SNCB-202ENST00000393693 STK38LQ9Y2H1 464 aa17.52■□□□□ 0.4
SNCB-202ENST00000393693 NCF1BA6NI72 391 aaPredicted RBP17.51■□□□□ 0.39
SNCB-202ENST00000393693 NCF1CA8MVU1 366 aaPredicted RBP17.51■□□□□ 0.39
SNCB-202ENST00000393693 TXNDC9O14530 226 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 SLC19A2O60779 497 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 DCTN3O75935 186 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 KITP10721 976 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 NCF1P14598 390 aaPredicted RBP17.51■□□□□ 0.39
SNCB-202ENST00000393693 COX6B1P14854 86 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 EEF1DP29692 281 aaKnown RBP17.51■□□□□ 0.39
SNCB-202ENST00000393693 HSD17B2P37059 387 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 AP1S2P56377 157 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 AP2B1P63010 937 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 ABATP80404 500 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 RELAQ04206 551 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 RBPJQ06330 500 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 SF3A3Q12874 501 aaKnown RBP eCLIP17.51■□□□□ 0.39
SNCB-202ENST00000393693 CDSNQ15517 529 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 NDUFA9Q16795 377 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 PPP1R3AQ16821 1122 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 UNC50Q53HI1 259 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 THEMIS2Q5TEJ8 643 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 RPTNQ6XPR3 784 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 GDF7Q7Z4P5 450 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 VN1R4Q7Z5H5 301 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 HOMEZQ8IX15 550 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 C10orf82Q8WW14 230 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 ASB11Q8WXH4 323 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 THOC1Q96FV9 657 aaKnown RBP17.51■□□□□ 0.39
SNCB-202ENST00000393693 LURAP1Q96LR2 239 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 SIGLEC12Q96PQ1 595 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 TSPAN10Q9H1Z9 355 aaPredicted RBP17.51■□□□□ 0.39
SNCB-202ENST00000393693 GSTO2Q9H4Y5 243 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 CHST11Q9NPF2 352 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 KLHL1Q9NR64 748 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 ANKRD10Q9NXR5 420 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 TEKT2Q9UIF3 430 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 HAO1Q9UJM8 370 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 DCTN4Q9UJW0 460 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 TINAGQ9UJW2 476 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 ADAMTS6Q9UKP5 1117 aa17.51■□□□□ 0.39
SNCB-202ENST00000393693 A0A0G2JND7 137 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 ERICH4A6NGS2 130 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 ZNF839A8K0R7 811 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 FAM227AF5H4B4 570 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 C19orf84I3L1E1 186 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 GFYI3L273 518 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 MAN1A2O60476 641 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 MLYCDO95822 493 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 IL1RNP18510 177 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 PTGER4P35408 488 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 TUBA3CQ13748 450 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 PCBP2Q15366 365 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNCB-202ENST00000393693 ACER2Q5QJU3 275 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 PLAG1Q6DJT9 500 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 MTFR2Q6P444 385 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 TUBA3EQ6PEY2 450 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 OR51Q1Q8NH59 317 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 RFWD2Q8NHY2 731 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 NPAS2Q99743 824 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 TMEM120AQ9BXJ8 343 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 PNPOQ9NVS9 261 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 WWOXQ9NZC7 414 aa17.5■□□□□ 0.39
SNCB-202ENST00000393693 MARCOQ9UEW3 520 aaPredicted RBP17.5■□□□□ 0.39
SNCB-202ENST00000393693 H0YIG0 161 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 SGK494L7N484 410 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 ZNHIT1O43257 154 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 NSA2O95478 260 aaKnown RBP17.49■□□□□ 0.39
SNCB-202ENST00000393693 CHRNGP07510 517 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 RPS17P08708 135 aaKnown RBP17.49■□□□□ 0.39
SNCB-202ENST00000393693 IMPA1P29218 277 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 XCR1P46094 333 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 HNMTP50135 292 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 AQP5P55064 265 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.49■□□□□ 0.39
SNCB-202ENST00000393693 H3F3CQ6NXT2 135 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 NCCRP1Q6ZVX7 275 aaPredicted RBP17.49■□□□□ 0.39
SNCB-202ENST00000393693 ANKRD37Q7Z713 158 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 ZNF295-AS1Q8N0V1 137 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 ZNF781Q8N8C0 355 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 FBXO15Q8NCQ5 510 aaPredicted RBP17.49■□□□□ 0.39
SNCB-202ENST00000393693 ADAMTS18Q8TE60 1221 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 ZNF354BQ96LW1 612 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 CCDC138Q96M89 665 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 TRIM8Q9BZR9 551 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 KCNK13Q9HB14 408 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 ARL15Q9NXU5 204 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 PTBP2Q9UKA9 531 aaKnown RBP17.49■□□□□ 0.39
SNCB-202ENST00000393693 AKAP9Q99996 3911 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 HEATR5BQ9P2D3 2071 aa17.49■□□□□ 0.39
SNCB-202ENST00000393693 TRPC5OSA6NMA1 111 aa17.48■□□□□ 0.39
SNCB-202ENST00000393693 SIX3O95343 332 aaPredicted RBP17.48■□□□□ 0.39
SNCB-202ENST00000393693 GUCA1CO95843 209 aa17.48■□□□□ 0.39
SNCB-202ENST00000393693 ESRRAP11474 423 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms