RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 PRPSAP2O60256 369 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 OR6A2O95222 327 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 CXCL14O95715 111 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 MT-ATP6P00846 226 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 MYOGP15173 224 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 ZNF26P17031 533 aaPredicted RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 ARF4P18085 180 aaPredicted RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 OR1D2P34982 312 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 PITPNBP48739 271 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 EVCP57679 992 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 HERV-K104P63124 156 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 HSPA14Q0VDF9 509 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 HNRNPA0Q13151 305 aaKnown RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 DRP2Q13474 957 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 GAMTQ14353 236 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 MPPE1Q53F39 396 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 C1orf189Q5VU69 101 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 NKAIN2Q5VXU1 208 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 RTL6Q6ICC9 239 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 CAPN13Q6MZZ7 669 aaPredicted RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 NEK5Q6P3R8 708 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 LCLAT1Q6UWP7 414 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 C17orf64Q86WR6 236 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 MRPL43Q8N983 215 aaKnown RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 ADAD2Q8NCV1 583 aaKnown RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 ZNF519Q8TB69 540 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 CD99L2Q8TCZ2 262 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 U2AF1L4Q8WU68 220 aaKnown RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 SLCO2A1Q92959 643 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 FAM111AQ96PZ2 611 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 ZNF300Q96RE9 604 aaPredicted RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 ERGIC2Q96RQ1 377 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 LITAFQ99732 161 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 FUNDC2Q9BWH2 189 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 DDX28Q9NUL7 540 aaKnown RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 CACNG5Q9UF02 275 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 FAM153AQ9UHL3 310 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 ISY1Q9ULR0 285 aaKnown RBP4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 WIPI2Q9Y4P8 454 aa4.65□□□□□ -1.67
RNU6-40P-201ENST00000384254 B3GALNT1O75752 331 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 PGK2P07205 417 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 PDHA2P29803 388 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 NUMBP49757 651 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 BACE1P56817 501 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 ERVK-16P61578 105 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 TMEM187Q14656 261 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 MEF2DQ14814 521 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 MTF1Q14872 753 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 FAM189A2Q15884 450 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 HIST2H2AA3Q6FI13 130 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 ZNF730Q6ZMV8 503 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 FRRS1Q6ZNA5 592 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 ADAMTSL2Q86TH1 951 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 CATSPERDQ86XM0 798 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 OR52E1Q8NGJ3 308 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 ATP8B4Q8TF62 1192 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 TCP11Q8WWU5 503 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 ART5Q96L15 291 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 FAM218AQ96MZ4 157 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 SPAG8Q99932 426 aaPredicted RBP4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 NACA2Q9H009 215 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 WWP1Q9H0M0 922 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 TXLNGQ9NUQ3 528 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 VPS54Q9P1Q0 977 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 ERVK-18Q9QC07 812 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 DNPEPQ9ULA0 475 aa4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 PIN4Q9Y237 131 aaKnown RBP4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 EXOGQ9Y2C4 368 aaKnown RBP4.64□□□□□ -1.67
RNU6-40P-201ENST00000384254 NR5A2O00482 541 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 RASGRF2O14827 1237 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 KIAA0513O60268 411 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 NME2P1O60361 137 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 ANGPTL1O95841 491 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 CALCAP01258 141 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 KRT5P13647 590 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 ETS1P14921 441 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 AOC1P19801 751 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 PKLRP30613 574 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 RPL9P32969 192 aaKnown RBP4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 ASMTP46597 345 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 ATXN3P54252 364 aaPredicted RBP4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 BPIFB3P59826 476 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 GMFBP60983 142 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 CDKL1Q00532 357 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 PMP22Q01453 160 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 RBBP4Q09028 425 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 OR1C1Q15619 314 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 GPAT3Q53EU6 434 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 RBM43Q6ZSC3 357 aaKnown RBP4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 CACUL1Q86Y37 369 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 OR52B6Q8NGF0 335 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 OR10G7Q8NGN6 311 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 OR4L1Q8NH43 312 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 GOLGA5Q8TBA6 731 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 TMEM186Q96B77 213 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 RAB39BQ96DA2 213 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 PINK1Q9BXM7 581 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 SLC26A1Q9H2B4 701 aa4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 FNDC4Q9H6D8 234 aaPredicted RBP4.63□□□□□ -1.67
RNU6-40P-201ENST00000384254 NINJ2Q9NZG7 142 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms