RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 FUBP3Q96I24 572 aaKnown RBP eCLIP11□□□□□ -0.651e-6■□□□□ 9.3
TM9SF2-201ENST00000376387 MAP6Q96JE9 813 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 SERINC2Q96SA4 455 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 RNF121Q9H920 327 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 ZFYVE1Q9HBF4 777 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 FTSJ1Q9UET6 329 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 A0A1W2PQL4 384 aaPredicted RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 ALPPP05187 535 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 OR3A3P47888 321 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 MVDP53602 400 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 SCN1BQ07699 218 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 ASAH1Q13510 395 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 BOP1Q14137 746 aaKnown RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 NFE2Q16621 373 aaPredicted RBP11□□□□□ -0.65
TM9SF2-201ENST00000376387 TIMM50Q3ZCQ8 353 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 TOR1AIP1Q5JTV8 583 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 SLC35F1Q5T1Q4 408 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 NPAS4Q8IUM7 802 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 VWA5B2Q8N398 1253 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 FRMD6Q96NE9 622 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 VPS35Q96QK1 796 aa11□□□□□ -0.65
TM9SF2-201ENST00000376387 SCN8AQ9UQD0 1980 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 FAM25AB3EWG3 89 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 FAM25CB3EWG5 89 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 FAM25GB3EWG6 89 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 RFXAPO00287 272 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 NDUFS6O75380 124 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 PCGF2P35227 344 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 RHOAP61586 193 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 RAE1P78406 368 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 B4GALNT1Q00973 533 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 C19orf57Q0VDD7 668 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 DUSP4Q13115 394 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 HNRNPA0Q13151 305 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF124Q15973 351 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 FLYWCH1Q4VC44 716 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 MPPE1Q53F39 396 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF385BQ569K4 471 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 MSANTD1Q6ZTZ1 278 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ANKS3Q6ZW76 656 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 GRPEL2Q8TAA5 225 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 C9orf43Q8TAL5 461 aaPredicted RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 RASSF5Q8WWW0 418 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 NMRK2Q9NPI5 230 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 FAM120CQ9NX05 1096 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 MRPL39Q9NYK5 338 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ERVK-19Q9WJR5 959 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 GLYATL1P3A0A0U1RQE8 302 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 FABP12A6NFH5 140 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 GLTPD2A6NH11 291 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 GBAP04062 536 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ABRQ12979 859 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 UAP1L1Q3KQV9 507 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 IFI44LQ53G44 452 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 MACC1Q6ZN28 852 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 LAS2Q8IYD9 372 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 L3MBTL4Q8NA19 623 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 GPR156Q8NFN8 814 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 OR5AK3PQ8NH89 298 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ZFAND1Q8TCF1 268 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 CSGALNACT1Q8TDX6 532 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 DEDD2Q8WXF8 326 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 FOXJ1Q92949 421 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 MYO19Q96H55 970 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 DIRAS2Q96HU8 199 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ZIC5Q96T25 663 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF556Q9HAH1 456 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ZDHHC4Q9NPG8 344 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 CLN6Q9NWW5 311 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 NDRG2Q9UN36 371 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 SNX11Q9Y5W9 270 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 HTTP42858 3142 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ZAR1LA6NP61 321 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 CHURC1-FNTBB4DL54 471 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ZNF670-ZNF695F2Z2N8 137 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 SMAD6O43541 496 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 SMPD2O60906 423 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 AP2A2O94973 939 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ARHGEF15O94989 841 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 TRAPPC2P0DI81 140 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 TRAPPC2BP0DI82 140 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 ITGALP20701 1170 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 SLC6A12P48065 614 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 GPR85P60893 370 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 CDC42P60953 191 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 SPHARQ15513 63 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 BTBD16Q32M84 506 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 PYDC2Q56P42 97 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 C22orf42Q6IC83 251 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 GPR65Q8IYL9 337 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 CELF5Q8N6W0 485 aaKnown RBP10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 SYT14Q8NB59 555 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 C11orf65Q8NCR3 313 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 OR4A15Q8NGL6 344 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 SLC6A18Q96N87 628 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 PTPN18Q99952 460 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 TTLL2Q9BWV7 592 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 UCK2Q9BZX2 261 aa10.99□□□□□ -0.65
TM9SF2-201ENST00000376387 SLC25A19Q9HC21 320 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms