RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RABIFP47224 123 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 CCR5P51681 352 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 DGKEP52429 567 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 EPS8Q12929 822 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 KCNAB2Q13303 367 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 LAPTM4AQ15012 233 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 CNPY1Q3B7I2 92 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 DCP2Q8IU60 420 aaKnown RBP18.6■□□□□ 0.57
HDAC1-201ENST00000373548 ZC3H7AQ8IWR0 971 aaKnown RBP18.6■□□□□ 0.57
HDAC1-201ENST00000373548 OR2L5Q8NG80 312 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 FLVCR1-AS1Q8TAF5 88 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 TWSG1Q9GZX9 223 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 LTB4R2Q9NPC1 389 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 C2orf42Q9NWW7 574 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 PRUNE2Q8WUY3 3088 aa18.6■□□□□ 0.57
HDAC1-201ENST00000373548 B4GALT2O60909 372 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 CHRNB1P11230 501 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 HIST1H1TP22492 207 aaPredicted RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 CDK9P50750 372 aaKnown RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 DSTNP60981 165 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 TUBA4AP68366 448 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 TSEN54Q7Z6J9 526 aaKnown RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 FRMD1Q8N878 549 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 ACOT4Q8N9L9 421 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 ZFP28Q8NHY6 868 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 ZBED6CLQ96FA7 236 aaPredicted RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 KCNC2Q96PR1 638 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 TCEAL2Q9H3H9 227 aaPredicted RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 ACSS1Q9NUB1 689 aaPredicted RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 APOBEC3BQ9UH17 382 aaKnown RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 ASB4Q9Y574 426 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 TRIM64CA6NLI5 447 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 WASHC1A8K0Z3 465 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 TOR1BO14657 336 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 PRKRAO75569 313 aaKnown RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 FPR1P21462 350 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 ATP5A1P25705 553 aaKnown RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 DNAJA1P31689 397 aaKnown RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 RPS26P62854 115 aaKnown RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 ILF3Q12906 894 aaKnown RBP eCLIP18.59■□□□□ 0.577e-7■■■■□ 24
HDAC1-201ENST00000373548 SLAMF1Q13291 335 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 SLC9A5Q14940 896 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 TTC23Q5W5X9 447 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 MRM1Q6IN84 353 aaKnown RBP18.59■□□□□ 0.57
HDAC1-201ENST00000373548 EHD3Q9NZN3 535 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 C3orf18Q9UK00 162 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 PADI2Q9Y2J8 665 aa18.59■□□□□ 0.57
HDAC1-201ENST00000373548 M0QX08 132 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 TNFP01375 233 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 ARFIP1P53367 373 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 PCBP3P57721 371 aaKnown RBP18.58■□□□□ 0.57
HDAC1-201ENST00000373548 ELOAQ14241 798 aaKnown RBP18.58■□□□□ 0.57
HDAC1-201ENST00000373548 TJAP1Q5JTD0 557 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 VN1R4Q7Z5H5 301 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 TRIM73Q86UV7 250 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 CYP4Z1Q86W10 505 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 HORMAD2Q8N7B1 307 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 PATE1Q8WXA2 126 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 SLC22A18Q96BI1 424 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 FAIM2Q9BWQ8 316 aa18.58■□□□□ 0.57
HDAC1-201ENST00000373548 RBM38Q9H0Z9 239 aaKnown RBP18.58■□□□□ 0.57
HDAC1-201ENST00000373548 SAMHD1Q9Y3Z3 626 aaKnown RBP18.58■□□□□ 0.57
HDAC1-201ENST00000373548 A0A1W2PR48 441 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 MAN2B1O00754 1011 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 ZW10O43264 779 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 DPM1O60762 260 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 ALDH3B2P48448 385 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 TDGQ13569 410 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 GPR18Q14330 331 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 KIR2DS3Q14952 304 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 MLC1Q15049 377 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 CRB2Q5IJ48 1285 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 CEACAM20Q6UY09 585 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 RBM44Q6ZP01 1051 aaKnown RBP18.58■□□□□ 0.56
HDAC1-201ENST00000373548 SYT13Q7L8C5 426 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 ZNF555Q8NEP9 628 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 PSMA8Q8TAA3 256 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 GPBAR1Q8TDU6 330 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 FCRL4Q96PJ5 515 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 OR2A14Q96R47 310 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 TSC22D3Q99576 134 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 GPR174Q9BXC1 333 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 ANGPT4Q9Y264 503 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 ATG4BQ9Y4P1 393 aa18.58■□□□□ 0.56
HDAC1-201ENST00000373548 A0A087WXM4 84 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 GLOD5A6NK44 160 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 MITFO75030 526 aaPredicted RBP18.57■□□□□ 0.56
HDAC1-201ENST00000373548 BMP10O95393 424 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 TNFRSF1BP20333 461 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 CERS1P27544 350 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 ARHGDIAP52565 204 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 RAD23AP54725 363 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 RAB8AP61006 207 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 EIF2B5Q13144 721 aaKnown RBP18.57■□□□□ 0.56
HDAC1-201ENST00000373548 CCDC85BQ15834 202 aaPredicted RBP18.57■□□□□ 0.56
HDAC1-201ENST00000373548 RFX4Q33E94 735 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 TNFAIP8L2Q6P589 184 aaPredicted RBP18.57■□□□□ 0.56
HDAC1-201ENST00000373548 C6orf120Q7Z4R8 191 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 ZNF687Q8N1G0 1237 aa18.57■□□□□ 0.56
HDAC1-201ENST00000373548 SPPL2AQ8TCT8 520 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms