RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 P2RX2Q9UBL9 471 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 VDAC3Q9Y277 283 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ASB3Q9Y575 518 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 FABP12A6NFH5 140 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 GLTPD2A6NH11 291 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 GABRR3A8MPY1 467 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 POLR1CO15160 346 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 NXPH3O95157 252 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 APOL3O95236 402 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 MT-CO2P00403 227 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ITGA2BP08514 1039 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 OR10J4P0C629 311 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 CD46P15529 392 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 NFYBP25208 207 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 GKP32189 559 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 SLC9A3P48764 834 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 EIF5AP63241 154 aaKnown RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 DMTNQ08495 405 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 UGT8Q16880 541 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 LRIT3Q3SXY7 679 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 SFRP5Q5T4F7 317 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 HEPHL1Q6MZM0 1159 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ESPNLQ6ZVH7 1005 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 PIM3Q86V86 326 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 OR10A6Q8NH74 314 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 SEC14L1Q92503 715 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 SECISBP2Q96T21 854 aaKnown RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ARPC5LQ9BPX5 153 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 TRMOQ9BU70 441 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 METTL9Q9H1A3 318 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 SOX17Q9H6I2 414 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 SNX15Q9NRS6 342 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 C1orf109Q9NX04 203 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 RHCGQ9UBD6 479 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 CD207Q9UJ71 328 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 DHDHQ9UQ10 334 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 SERTM2A0A1B0GWG4 89 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 CAPN8A6NHC0 703 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 VSTM2BA6NLU5 285 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 CEBPZOSA8MTT3 80 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 CENPBD1B2RD01 187 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 LATO43561 262 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 DNAJA2O60884 412 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 DUSP11O75319 330 aaKnown RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 POP7O75817 140 aaKnown RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 TUSC2O75896 110 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 CER1O95813 267 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 G0S2P27469 103 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 RAB31Q13636 194 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 Q1RN00 199 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 LIPMQ5VYY2 423 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 DESI1Q6ICB0 168 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 PPTC7Q8NI37 304 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 NFKBIDQ8NI38 313 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 PROKR1Q8TCW9 393 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 DDX1Q92499 740 aaKnown RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ZNF75CPQ92670 426 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 CCDC106Q9BWC9 280 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 RNF38Q9H0F5 515 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 POT1Q9NUX5 634 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 PNPOQ9NVS9 261 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ATP23Q9Y6H3 246 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 PIAS3Q9Y6X2 628 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ZCCHC11Q5TAX3 1644 aaKnown RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 H3BMQ9 156 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 PI15O43692 258 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 RAD1O60671 282 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 IFNA1P01562 189 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ERBB2P04626 1255 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 PNMTP11086 282 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ZNF43P17038 809 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 TCN2P20062 427 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 EMP3P54852 163 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 DSTNP60981 165 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 TLE3Q04726 772 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ZNF616Q08AN1 781 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 SQSTM1Q13501 440 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ALX1Q15699 326 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 NHSL2Q5HYW2 709 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 MEX3BQ6ZN04 569 aaKnown RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ALYREFQ86V81 257 aaKnown RBP5.59□□□□□ -1.51
BRCA1-203ENST00000357654 UNC93AQ86WB7 457 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 MARCH9Q86YJ5 346 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 TP53INP2Q8IXH6 220 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 CMTM8Q8IZV2 173 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 ZADH2Q8N4Q0 377 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 TTLQ8NG68 377 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 OR4K15Q8NH41 348 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 SLC5A11Q8WWX8 675 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 RSC1A1Q92681 617 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 MALSU1Q96EH3 234 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 PORCNQ9H237 461 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 RGCCQ9H4X1 137 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 FOLH1BQ9HBA9 442 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 NINJ2Q9NZG7 142 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 KCMF1Q9P0J7 381 aa5.59□□□□□ -1.51
BRCA1-203ENST00000357654 TRAF6Q9Y4K3 522 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms