RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 PCP4L1A6NKN8 68 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 J3KR12 359 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ACOT7O00154 380 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 FBP2O00757 339 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SIX3O95343 332 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 G6PDP11413 515 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ACVRL1P37023 503 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 PREPP48147 710 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 CAV3P56539 151 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 RHDQ02161 417 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF267Q14586 743 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 ARL6IP1Q15041 203 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 UAP1L1Q3KQV9 507 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 TMEM35AQ53FP2 167 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ARHGAP11AQ6P4F7 1023 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 C6orf120Q7Z4R8 191 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 OR56A3Q8NH54 315 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SLC35F5Q8WV83 523 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 HDAC2Q92769 488 aaKnown RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 RANBP9Q96S59 729 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZNF559Q9BR84 538 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 DEFB126Q9BYW3 111 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SLC7A8Q9UHI5 535 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZDHHC2Q9UIJ5 367 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 HCN2Q9UL51 889 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 ITM2AO43736 263 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 FGF18O76093 207 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 TBX18O95935 607 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 DLDP09622 509 aaKnown RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 DRD2P14416 443 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 THBS2P35442 1172 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 NRLP54845 237 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 RAB8AP61006 207 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 GALK2Q01415 458 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SLC18A2Q05940 514 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 TMEM115Q12893 351 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 ACSBG2Q5FVE4 666 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 TXNDC8Q6A555 127 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 SHQ1Q6PI26 577 aaKnown RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 OR5M3Q8NGP4 307 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 TRIM43Q96BQ3 446 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 C12orf43Q96C57 262 aaKnown RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 GIMAP5Q96F15 307 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 OR8D2Q9GZM6 311 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 HOXD1Q9GZZ0 328 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 MMP27Q9H306 513 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 RANBP3Q9H6Z4 567 aaPredicted RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 RPF2Q9H7B2 306 aaKnown RBP6.23□□□□□ -1.41
UPF2-201ENST00000356352 ZDHHC18Q9NUE0 388 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 KCNIP1Q9NZI2 227 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 RBPJLQ9UBG7 517 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 EPHA6Q9UF33 1036 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 RNF11Q9Y3C5 154 aa6.23□□□□□ -1.41
UPF2-201ENST00000356352 LRRTM2O43300 516 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 GPR37L1O60883 481 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 MTX2O75431 263 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 OAZ2O95190 189 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 AHSGP02765 367 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 SLC25A11Q02978 314 aaKnown RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 TGFBIQ15582 683 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ZNF829Q3KNS6 432 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 ZDHHC24Q6UX98 284 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 ZNF100Q8IYN0 542 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 TOR1AIP2Q8NFQ8 470 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 CD300LFQ8TDQ1 290 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 TMEM203Q969S6 136 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 MMABQ96EY8 250 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 PIP5K1AQ99755 562 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 POTEKPQ9BYX7 375 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 MEPEQ9NQ76 525 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 FAM86C1Q9NVL1 165 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 HRASLS2Q9NWW9 162 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 GPRC5BQ9NZH0 403 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 GSKIPQ9P0R6 139 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 GALPQ9UBC7 116 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 GPR34Q9UPC5 381 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 DLGAP4Q9Y2H0 992 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 TMEM98Q9Y2Y6 226 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 WNT6Q9Y6F9 365 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 C2orf92A0A1B0GVN3 265 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 MTMR11A4FU01 709 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 AGAP5A6NIR3 686 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 RNF225M0QZC1 329 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 CCRL2O00421 344 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 RBBP9O75884 186 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 C1GALT1C1LP0DN25 315 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 CDK2P24941 298 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 DGKQP52824 942 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 DLX2Q07687 328 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 INCA1Q0VD86 236 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 LASP1Q14847 261 aaKnown RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 ATP6AP1Q15904 470 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 NKAPLQ5M9Q1 402 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 OR52E8Q6IFG1 317 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 SLC27A4Q6P1M0 643 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 C1orf94Q6P1W5 598 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 UNC5DQ6UXZ4 953 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 LRRC25Q8N386 305 aaPredicted RBP6.22□□□□□ -1.41
UPF2-201ENST00000356352 HAVCR2Q8TDQ0 301 aa6.22□□□□□ -1.41
UPF2-201ENST00000356352 CHPT1Q8WUD6 406 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms