RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SARDHQ9UL12 918 aa13.11□□□□□ -0.31
SMC6-201ENST00000351948 SGK494L7N484 410 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 SORBS2O94875 1100 aaKnown RBP13.1□□□□□ -0.31
SMC6-201ENST00000351948 ZNF888P0CJ79 500 aaPredicted RBP13.1□□□□□ -0.31
SMC6-201ENST00000351948 HRH2P25021 359 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 MMP12P39900 470 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 PRLHRP49683 370 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 CHERPQ8IWX8 916 aaKnown RBP13.1□□□□□ -0.31
SMC6-201ENST00000351948 ATOH1Q92858 354 aaPredicted RBP13.1□□□□□ -0.31
SMC6-201ENST00000351948 DEFB126Q9BYW3 111 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 RMI1Q9H9A7 625 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 TMEM184CQ9NVA4 438 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 TAF1LQ8IZX4 1826 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 ARID1BQ8NFD5 2236 aaPredicted RBP13.1□□□□□ -0.31
SMC6-201ENST00000351948 A0A096LPI6 279 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 CENPXA8MT69 81 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 CPNE3O75131 537 aaKnown RBP13.1□□□□□ -0.31
SMC6-201ENST00000351948 TNFRSF1BP20333 461 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 ACADVLP49748 655 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 CLDN8P56748 225 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 TYSND1Q2T9J0 566 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 SPATC1Q76KD6 591 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 ATOH8Q96SQ7 321 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 FOXQ1Q9C009 403 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 FAM192AQ9GZU8 254 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 CMTM6Q9NX76 183 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 C19orf25Q9UFG5 118 aaPredicted RBP13.1□□□□□ -0.31
SMC6-201ENST00000351948 C1orf105O95561 183 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 SYPP08247 313 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 HSD3B1P14060 373 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 HSD3B2P26439 372 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 GRHL2Q6ISB3 625 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 OGFOD2Q6N063 350 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 SUN3Q8TAQ9 357 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 ASB11Q8WXH4 323 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 EZH1Q92800 747 aaPredicted RBP13.1□□□□□ -0.31
SMC6-201ENST00000351948 GPER1Q99527 375 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 TRIM2Q9C040 744 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 KCMF1Q9P0J7 381 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 TAAR2Q9P1P5 351 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 KLHL33A6NCF5 533 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 DHRS4L1P0CG22 281 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 IFI30P13284 250 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 OTX2P32243 289 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 NFATC4Q14934 902 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 VMACQ2NL98 169 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 KLHL24Q6TFL4 600 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 C12orf40Q86WS4 652 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 SLC30A8Q8IWU4 369 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 KIAA1143Q96AT1 154 aaPredicted RBP13.1□□□□□ -0.31
SMC6-201ENST00000351948 FBXL20Q96IG2 436 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 SEC61A2Q9H9S3 476 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 PREBQ9HCU5 417 aa13.1□□□□□ -0.31
SMC6-201ENST00000351948 PLD2O14939 933 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 SCAMP2O15127 329 aaKnown RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 CDC40O60508 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMC6-201ENST00000351948 TNFRSF4P43489 277 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 ATP4BP51164 291 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 ARMC3Q5W041 872 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 CARM1Q86X55 608 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 CNTN4Q8IWV2 1026 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 LRIT1Q9P2V4 623 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 I6L893 689 aaPredicted RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 NUAK1O60285 661 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 RPS17P08708 135 aaKnown RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 ZDHHC11BP0C7U3 371 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 ZNF823P16415 610 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 GNALP38405 381 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 GRM7Q14831 915 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 KCTD8Q6ZWB6 473 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 WDR53Q7Z5U6 358 aaPredicted RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 SDR16C5Q8N3Y7 309 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 HSPBAP1Q96EW2 488 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 C20orf27Q9GZN8 174 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 CENPMQ9NSP4 180 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 BCAT2O15382 392 aaPredicted RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 PORP16435 677 aaPredicted RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 ACVR2AP27037 513 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 EIF1AXP47813 144 aaKnown RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 SLC9A3P48764 834 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 SYT16Q17RD7 645 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 PYDC2Q56P42 97 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 PAGE3Q5JUK9 113 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 VTCN1Q7Z7D3 282 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 NEK7Q8TDX7 302 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 GFM1Q96RP9 751 aaKnown RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 ACPTQ9BZG2 426 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 HMG20AQ9NP66 347 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 DKK3Q9UBP4 350 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 YBX2Q9Y2T7 364 aaKnown RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 PSMD9O00233 223 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 LDB3O75112 727 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 ST3GAL3Q11203 375 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 MBNL1Q9NR56 388 aaKnown RBP13.09□□□□□ -0.31
SMC6-201ENST00000351948 SERINC1Q9NRX5 453 aa13.09□□□□□ -0.31
SMC6-201ENST00000351948 TLX2O43763 284 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms