RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ADCK1Q86TW2 530 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 UBE2J2Q8N2K1 259 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 DOK4Q8TEW6 326 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 FBXO4Q9UKT5 387 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 RNF215Q9Y6U7 377 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 RIIAD1A6NNX1 92 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 GMPRP36959 345 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 OR1D4P47884 311 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF33BQ06732 778 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 PTGR1Q14914 329 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 RFX4Q33E94 735 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 PDCD4Q53EL6 469 aaKnown RBP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 ATG9BQ674R7 924 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 SLC2A7Q6PXP3 512 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 RNF130Q86XS8 419 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 CNTN4Q8IWV2 1026 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 FRMD1Q8N878 549 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 RBM15BQ8NDT2 890 aaKnown RBP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF548Q8NEK5 533 aaPredicted RBP8.84□□□□□ -0.99
PTPRE-202ENST00000306042 TBC1D29Q9UFV1 150 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 ADAMTS6Q9UKP5 1117 aa8.84□□□□□ -0.99
PTPRE-202ENST00000306042 ARHGEF15O94989 841 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 SERPINA1P01009 418 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 FGF3P11487 239 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 AVPR2P30518 371 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 RAPSNQ13702 412 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 ZNF630Q2M218 657 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 ZIK1Q3SY52 487 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 DENND5AQ6IQ26 1287 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 TMEM107Q6UX40 140 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 AMIGO2Q86SJ2 522 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 IQCHQ86VS3 1027 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 RAB8BQ92930 207 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 RSPRY1Q96DX4 576 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 COQ10AQ96MF6 247 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 MACROD1Q9BQ69 325 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 ZNF717Q9BY31 904 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 IL1RAPQ9NPH3 570 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 TESMINQ9Y4I5 508 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 ZDBF2Q9HCK1 2354 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 IGHV1OR15-9A0A0B4J2B8 117 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 SPTY2D1-AS1A0A0U1RR47 76 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 C17orf105B2RV13 164 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 VNN2O95498 520 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 ACPPP15309 386 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 ATP6V1B1P15313 513 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 S100A5P33763 92 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 MYBPC1Q00872 1141 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 KLC1Q07866 573 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 NRF1Q16656 503 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 SYT16Q17RD7 645 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 METRNLQ641Q3 311 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 ETFBKMTQ8IXQ9 262 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 C8orf59Q8N0T1 100 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 GATSQ8NAP1 163 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 OR52E4Q8NGH9 312 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 WDR36Q8NI36 951 aaKnown RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 SEMA6CQ9H3T2 930 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 KIR3DX1Q9H7L2 352 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 AGPAT4Q9NRZ5 378 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 PDP1Q9P0J1 537 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 MCM8Q9UJA3 840 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 NXT1Q9UKK6 140 aaKnown RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 ATXN7L1Q9ULK2 861 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 PTGES3LE9PB15 166 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 hCG_2039718K7EN88 272 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 PRAMEF2O60811 474 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 IL33O95760 270 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 UBTFL6P0CB48 400 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 ICAM2P13598 275 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 DIO3P55073 304 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 MTX3Q5HYI7 312 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 HPS6Q86YV9 775 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 OR10Q1Q8NGQ4 319 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 TANKQ92844 425 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 PPP1R14AQ96A00 147 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 PDLIM5Q96HC4 596 aaKnown RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 GPATCH1Q9BRR8 931 aaKnown RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 TWSG1Q9GZX9 223 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 SLC35C2Q9NQQ7 365 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 SMOXQ9NWM0 555 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 CUEDC1Q9NWM3 386 aaPredicted RBP8.83□□□□□ -1
PTPRE-202ENST00000306042 MKS1Q9NXB0 559 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 LOC285556D6RIA3 1793 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 CDC14CA4D256 554 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 AREL1O15033 823 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 GADD45GO95257 159 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 CSTAP01040 98 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 NCK1P16333 377 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 AHRP35869 848 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 PDX1P52945 283 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 RAET1LQ5VY80 246 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 EPGNQ6UW88 154 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 SVOPQ8N4V2 548 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 ACOT4Q8N9L9 421 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 OR9A4Q8NGU2 314 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 NFKBIDQ8NI38 313 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 ZFPM2Q8WW38 1151 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 LRRC58Q96CX6 371 aa8.83□□□□□ -1
PTPRE-202ENST00000306042 GABRG3Q99928 467 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms