RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CSF2P04141 144 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 FAM58BPP0C7Q3 252 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 NME1P15531 152 aaKnown RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 TSFMP43897 325 aaKnown RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 HHEXQ03014 270 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SLC9A5Q14940 896 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 VN1R4Q7Z5H5 301 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 ASPGQ86U10 573 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 EPHX4Q8IUS5 362 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 EID3Q8N140 333 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 C7orf57Q8NEG2 295 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 OR8K5Q8NH50 307 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 HSPA12BQ96MM6 686 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 NR1H4Q96RI1 486 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 C9orf16Q9BUW7 83 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 FAIM2Q9BWQ8 316 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 MAGIXQ9H6Y5 334 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 TLR4O00206 839 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 DRD2P14416 443 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 IL1RNP18510 177 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 ATP5A1P25705 553 aaKnown RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SOAT1P35610 550 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 BPIFB3P59826 476 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 RGS1Q08116 209 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 TGM3Q08188 693 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 ELOCQ15369 112 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 PPP4R4Q6NUP7 873 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 FIGLAQ6QHK4 219 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SPESP1Q6UW49 350 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 TMEM26Q6ZUK4 368 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 ZCCHC7Q8N3Z6 543 aaKnown RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 ESX1Q8N693 406 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 PACRGLQ8N7B6 248 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 OR52N2Q8NGI0 321 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 NT5CQ8TCD5 201 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 ZNF597Q96LX8 424 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 FCRL4Q96PJ5 515 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SLC29A1Q99808 456 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 BDH2Q9BUT1 245 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 MIR1-1HGQ9H1L0 117 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 ACSL6Q9UKU0 697 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 CLOCKO15516 846 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 FKBP9O95302 570 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 HOXB6P17509 224 aaKnown RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 CHI3L1P36222 383 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 MVDP53602 400 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SLAMF1Q13291 335 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 VEZF1Q14119 521 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 NKG7Q16617 165 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SLC5A12Q1EHB4 618 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 TMTC4Q5T4D3 741 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 NDUFAF5Q5TEU4 345 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 FCRL6Q6DN72 434 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 FAM180BQ6P0A1 224 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 FBXO42Q6P3S6 717 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SLC36A4Q6YBV0 504 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 ACOT4Q8N9L9 421 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 OR5P2Q8WZ92 322 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 EXOSC8Q96B26 276 aaKnown RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 TM9SF3Q9HD45 589 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SLAMF7Q9NQ25 335 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 HRASLS2Q9NWW9 162 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 EHD3Q9NZN3 535 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 C5AR2Q9P296 337 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 OAZ3Q9UMX2 235 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SAMD4AQ9UPU9 718 aaKnown RBP13.54□□□□□ -0.24
C9orf3-202ENST00000297979 AP4B1Q9Y6B7 739 aa13.54□□□□□ -0.24
C9orf3-202ENST00000297979 SOCS2O14508 198 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 GUCY1B2O75343 617 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 DEAF1O75398 565 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 NUDT7P0C024 238 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 SLC35G6P0C7Q6 338 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 FRKP42685 505 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 CRATP43155 626 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 CXCL12P48061 93 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 MRM1Q6IN84 353 aaKnown RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 NCCRP1Q6ZVX7 275 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 OR5AK3PQ8NH89 298 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 GAL3ST3Q96A11 431 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 RAD21L1Q9H4I0 556 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 NEUROD4Q9HD90 331 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 GPATCH2Q9NW75 528 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 TAS2R7Q9NYW3 318 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 FAF1Q9UNN5 650 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 SIT1Q9Y3P8 196 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 KLK4Q9Y5K2 254 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 TDRD6O60522 2096 aaKnown RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 DENRO43583 198 aaKnown RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 CTSVO60911 334 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 KRT75O95678 551 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 DCNP07585 359 aaKnown RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 UQCRC2P22695 453 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 PCGF2P35227 344 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 MANFP55145 182 aaKnown RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 PCBP4P57723 403 aaKnown RBP13.53□□□□□ -0.24
C9orf3-202ENST00000297979 RAB8AP61006 207 aa13.53□□□□□ -0.24
C9orf3-202ENST00000297979 FADDQ13158 208 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms