RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 IRF5Q13568 498 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 TMEM69Q5SWH9 247 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 PACRGLQ8N7B6 248 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 POC1BQ8TC44 478 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 ASB15Q8WXK1 588 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 REV1Q9UBZ9 1251 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 SEC14L4Q9UDX3 406 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 INMT-MINDY4F8WBC2 141 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 COL28A1Q2UY09 1125 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 OR5B12Q96R08 314 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 NELL2Q99435 816 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 ARL6Q9H0F7 186 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 B3GALT1Q9Y5Z6 326 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 CAPN5O15484 640 aaPredicted RBP15.53■□□□□ 0.08
SSRP1-202ENST00000293880 SGCEO43556 437 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 BCAS2O75934 225 aaPredicted RBP15.53■□□□□ 0.08
SSRP1-202ENST00000293880 BEST1O76090 585 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 OXSR1O95747 527 aaPredicted RBP15.53■□□□□ 0.08
SSRP1-202ENST00000293880 GP1BBP13224 206 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 FPR1P21462 350 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 CFL1P23528 166 aaKnown RBP15.53■□□□□ 0.08
SSRP1-202ENST00000293880 GLP1RP43220 463 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 PTCHD3Q3KNS1 767 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 ZNF792Q3KQV3 632 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 SCGB1C1Q8TD33 95 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 TCEAL3Q969E4 200 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 RAB11FIP5Q9BXF6 653 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 RNF39Q9H2S5 420 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 A0A0D9SEW6 157 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 EEF1E1-BLOC1S5C9J1V9 151 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 GDI1P31150 447 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 CCDC116Q8IYX3 515 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 Q8N402 240 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 TTLQ8NG68 377 aa15.53■□□□□ 0.08
SSRP1-202ENST00000293880 PAK1IP1Q9NWT1 392 aaPredicted RBP15.53■□□□□ 0.08
SSRP1-202ENST00000293880 ALDH3B1P43353 468 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 ENPP6Q6UWR7 440 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 TMEM107Q6UX40 140 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.52■□□□□ 0.08
SSRP1-202ENST00000293880 ZNF550Q7Z398 422 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 OR7G2Q8NG99 324 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 OR6N1Q8NGY5 312 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 NEIL3Q8TAT5 605 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 FCRL3Q96P31 734 aaPredicted RBP15.52■□□□□ 0.08
SSRP1-202ENST00000293880 AIPO00170 330 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 FLRT2O43155 660 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 GSTT2P0CG29 244 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 CASRP41180 1078 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 LEPRP48357 1165 aaKnown RBP15.52■□□□□ 0.08
SSRP1-202ENST00000293880 GATMP50440 423 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 DECR1Q16698 335 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 TMCO2Q7Z6W1 182 aaPredicted RBP15.52■□□□□ 0.08
SSRP1-202ENST00000293880 LRRTM4Q86VH4 590 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 ZNF317Q96PQ6 595 aaPredicted RBP15.52■□□□□ 0.08
SSRP1-202ENST00000293880 EXOSC1Q9Y3B2 195 aaKnown RBP15.52■□□□□ 0.08
SSRP1-202ENST00000293880 ADGRB2O60241 1585 aa15.52■□□□□ 0.08
SSRP1-202ENST00000293880 M0R129 80 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 COQ9O75208 318 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 SORBS2O94875 1100 aaKnown RBP15.52■□□□□ 0.07
SSRP1-202ENST00000293880 H2AFB2P0C5Z0 115 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 HTR2AP28223 471 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 GINS1Q14691 196 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 SFRP4Q6FHJ7 346 aaPredicted RBP15.52■□□□□ 0.07
SSRP1-202ENST00000293880 ARHGAP12Q8IWW6 846 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 ZNF709Q8N972 641 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 NINJ1Q92982 152 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 SCRN2Q96FV2 425 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 PRMT8Q9NR22 394 aaPredicted RBP15.52■□□□□ 0.07
SSRP1-202ENST00000293880 GPATCH2Q9NW75 528 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.52■□□□□ 0.07
SSRP1-202ENST00000293880 AGAP5A6NIR3 686 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 SLC6A6P31641 620 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 FOXR2Q6PJQ5 311 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 KLBQ86Z14 1044 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 CILP2Q8IUL8 1156 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 ACBD4Q8NC06 268 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 TMEM45AQ9NWC5 275 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 POP7O75817 140 aaKnown RBP15.52■□□□□ 0.07
SSRP1-202ENST00000293880 PRKAR1BP31321 381 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 PTGR1Q14914 329 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 PPP2R2DQ66LE6 453 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 DNM1P34Q6PK57 102 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 TXNDC5Q8NBS9 432 aaKnown RBP15.52■□□□□ 0.07
SSRP1-202ENST00000293880 FRZBQ92765 325 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 PSKH2Q96QS6 385 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 POLMQ9NP87 494 aaPredicted RBP15.52■□□□□ 0.07
SSRP1-202ENST00000293880 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.52■□□□□ 0.07
SSRP1-202ENST00000293880 WNT6Q9Y6F9 365 aa15.52■□□□□ 0.07
SSRP1-202ENST00000293880 UNC119BA6NIH7 251 aa15.51■□□□□ 0.07
SSRP1-202ENST00000293880 KIAA0513O60268 411 aa15.51■□□□□ 0.07
SSRP1-202ENST00000293880 SRPRAP08240 638 aaKnown RBP15.51■□□□□ 0.07
SSRP1-202ENST00000293880 DIO3P55073 304 aa15.51■□□□□ 0.07
SSRP1-202ENST00000293880 SGCAQ16586 387 aa15.51■□□□□ 0.07
SSRP1-202ENST00000293880 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.51■□□□□ 0.07
SSRP1-202ENST00000293880 ZNF367Q7RTV3 350 aa15.51■□□□□ 0.07
SSRP1-202ENST00000293880 NDNFQ8TB73 568 aa15.51■□□□□ 0.07
SSRP1-202ENST00000293880 OSTF1Q92882 214 aa15.51■□□□□ 0.07
SSRP1-202ENST00000293880 C1orf21Q9H246 121 aa15.51■□□□□ 0.07
SSRP1-202ENST00000293880 CD93Q9NPY3 652 aa15.51■□□□□ 0.07
SSRP1-202ENST00000293880 FETUBQ9UGM5 382 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms