RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 SALL4Q9UJQ4 1053 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TPRP12270 2363 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 GXYLT2A0PJZ3 443 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 C6orf47O95873 294 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 GTF2F2P13984 249 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 RFC2P35250 354 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 HMGCS1Q01581 520 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 OR4F3Q6IEY1 312 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 ZFAND4Q86XD8 727 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 NRROSQ86YC3 692 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 ANKRD13BQ86YJ7 626 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 FTMTQ8N4E7 242 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TSTD1Q8NFU3 115 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TREX2Q9BQ50 279 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 PARPBPQ9NWS1 579 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 MAST2Q6P0Q8 1798 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 HYKKA2RU49 373 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 SPARCP09486 303 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 BDKRB1P46663 353 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CDH15P55291 814 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 IRF5Q13568 498 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF267Q14586 743 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CHRNA6Q15825 494 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 OR5AK3PQ8NH89 298 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 OR5B12Q96R08 314 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 BARD1Q99728 777 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 VRK1Q99986 396 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TTYH2Q9BSA4 534 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 FN3KQ9H479 309 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TAS2R9Q9NYW1 312 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 TAC3Q9UHF0 121 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 HS3ST4Q9Y661 456 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 SOBPA7XYQ1 873 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 ARHGEF15O94989 841 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CHRM5P08912 532 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CKMT2P17540 419 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 INCA1Q0VD86 236 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 SLC10A6Q3KNW5 377 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 ITPRIPL2Q3MIP1 535 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 FOXRED2Q8IWF2 684 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 MRPL41Q8IXM3 137 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 DRAXINQ8NBI3 349 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 MFSD8Q8NHS3 518 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 ITPKCQ96DU7 683 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 MTG2Q9H4K7 406 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CARS2Q9HA77 564 aaKnown RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 CCM2LQ9NUG4 571 aaPredicted RBP7.69□□□□□ -1.18
LIMD1-201ENST00000273317 SLC7A11Q9UPY5 501 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 AP1M2Q9Y6Q5 423 aa7.69□□□□□ -1.18
LIMD1-201ENST00000273317 E2F3O00716 465 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 WNT7AO00755 349 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 JUNP05412 331 aaKnown RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 MYF6P23409 242 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 CHRNA4P43681 627 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 TXNDC5Q8NBS9 432 aaKnown RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 OR9A1PQ8NGU1 263 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ADAMTS18Q8TE60 1221 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ASB15Q8WXK1 588 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SLC28A3Q9HAS3 691 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 C2orf92A0A1B0GVN3 265 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 MUSKO15146 869 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 C8AP07357 584 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 LMO2P25791 158 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ALDH3B2P48448 385 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 GPR143P51810 404 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SELENOVP59797 346 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 IFNL1Q8IU54 200 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SCML4Q8N228 414 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 COQ8AQ8NI60 647 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ARNTL2Q8WYA1 636 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 FAM83CQ9BQN1 747 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF559Q9BR84 538 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 TIGARQ9NQ88 270 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 TDP1Q9NUW8 608 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SLC45A1Q9Y2W3 748 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 KIF13AQ9H1H9 1805 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 BTBD19C9JJ37 291 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 TP53I11O14683 189 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 KDELR3O43731 214 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 PRAMEF11O60813 436 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 H2AFB2P0C5Z0 115 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 G6PDP11413 515 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 SOWAHAQ2M3V2 549 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 PYCR2Q96C36 320 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 CCDC120Q96HB5 630 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 RXFP3Q9NSD7 469 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 AMY2BP19961 511 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 NFE2L1Q14494 772 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 BCL2A1Q16548 175 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 MEP1AQ16819 746 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 FAM214AQ32MH5 1076 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ZNF792Q3KQV3 632 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 CELF5Q8N6W0 485 aaKnown RBP7.68□□□□□ -1.18
LIMD1-201ENST00000273317 PROKR1Q8TCW9 393 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 NSMAFQ92636 917 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 CDK15Q96Q40 435 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 RANBP9Q96S59 729 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 MPDZO75970 2070 aa7.68□□□□□ -1.18
LIMD1-201ENST00000273317 ANKRD66B4E2M5 251 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms