RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 RDH11Q8TC12 318 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 TCP10LQ8TDR4 215 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 ADAMTS18Q8TE60 1221 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 AGAP11Q8TF27 550 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 AGAP4Q96P64 663 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 KCNA7Q96RP8 456 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 SMC6Q96SB8 1091 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 LPAR4Q99677 370 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 MRPL1Q9BYD6 325 aaKnown RBP11.89□□□□□ -0.51
LSM5-201ENST00000223084 SHCBP1LQ9BZQ2 653 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 IQCGQ9H095 443 aaKnown RBP11.89□□□□□ -0.51
LSM5-201ENST00000223084 CENPHQ9H3R5 247 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 DDX31Q9H8H2 851 aaKnown RBP11.89□□□□□ -0.51
LSM5-201ENST00000223084 MID1IP1Q9NPA3 183 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
LSM5-201ENST00000223084 PNO1Q9NRX1 252 aaKnown RBP11.89□□□□□ -0.51
LSM5-201ENST00000223084 OXSMQ9NWU1 459 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 PSD3Q9NYI0 1048 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 C5AR2Q9P296 337 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 SLC12A4Q9UP95 1085 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 ATG4BQ9Y4P1 393 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 TIMM22Q9Y584 194 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 CSAG2Q9Y5P2 127 aa11.89□□□□□ -0.51
LSM5-201ENST00000223084 A0A0A6YYD5 115 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 WASHC1A8K0Z3 465 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 CLDN4O14493 209 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 RGS16O15492 202 aaPredicted RBP11.88□□□□□ -0.51
LSM5-201ENST00000223084 DPM1O60762 260 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 LDB3O75112 727 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 ICAM2P13598 275 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 HMOX2P30519 316 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 ALDH3A1P30838 453 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 ST13P50502 369 aaKnown RBP11.88□□□□□ -0.51
LSM5-201ENST00000223084 FOXA1P55317 472 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 PKNOX1P55347 436 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 HSD17B7P56937 341 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 CFAP157Q5JU67 520 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 LIPMQ5VYY2 423 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 C18orf63Q68DL7 685 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 FCRLBQ6BAA4 426 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 PLAG1Q6DJT9 500 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 RIPOR1Q6ZS17 1223 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 FRMD7Q6ZUT3 714 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 GPR180Q86V85 440 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 OR4N5Q8IXE1 308 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 ZNF595Q8IYB9 648 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 ZCCHC7Q8N3Z6 543 aaKnown RBP11.88□□□□□ -0.51
LSM5-201ENST00000223084 MYRIPQ8NFW9 859 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 METTL6Q8TCB7 284 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 UCN3Q969E3 161 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 MECRQ9BV79 373 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 SLC29A3Q9BZD2 475 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 TRIM4Q9C037 500 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 EPN3Q9H201 632 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 TNFRSF12AQ9NP84 129 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 MID2Q9UJV3 735 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 ANAPC2Q9UJX6 822 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 PPT2Q9UMR5 302 aa11.88□□□□□ -0.51
LSM5-201ENST00000223084 MRPS33Q9Y291 106 aaKnown RBP11.88□□□□□ -0.51
LSM5-201ENST00000223084 A0A1W2PR48 441 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 A8MUI8 341 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 KLHL41O60662 606 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 CTNSO60931 367 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 ESRRBO95718 433 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 KRT6AP02538 564 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 KRT6BP04259 564 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 ENO1P06733 434 aaKnown RBP11.87□□□□□ -0.51
LSM5-201ENST00000223084 KLK1P06870 262 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 UQCRHP07919 91 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 FAM58BPP0C7Q3 252 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 PLA2G2AP14555 144 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 SOX11P35716 441 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 CASRP41180 1078 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 TSFMP43897 325 aaKnown RBP11.87□□□□□ -0.51
LSM5-201ENST00000223084 KRT6CP48668 564 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 SLC26A5P58743 744 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 MFAP5Q13361 173 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 RCN2Q14257 317 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 EXT1Q16394 746 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 PLEKHN1Q494U1 663 aaPredicted RBP11.87□□□□□ -0.51
LSM5-201ENST00000223084 BEND6Q5SZJ8 279 aaPredicted RBP11.87□□□□□ -0.51
LSM5-201ENST00000223084 SLC6A19Q695T7 634 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 MRM1Q6IN84 353 aaKnown RBP11.87□□□□□ -0.51
LSM5-201ENST00000223084 JMJD6Q6NYC1 403 aaPredicted RBP11.87□□□□□ -0.51
LSM5-201ENST00000223084 CYP20A1Q6UW02 462 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 ISLR2Q6UXK2 745 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 ATG14Q6ZNE5 492 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 NUDT13Q86X67 352 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 METTL4Q8N3J2 472 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 KIF2BQ8N4N8 673 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 ZADH2Q8N4Q0 377 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 NFAM1Q8NET5 270 aaPredicted RBP11.87□□□□□ -0.51
LSM5-201ENST00000223084 M1APQ8TC57 530 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 ANKRD9Q96BM1 317 aaPredicted RBP11.87□□□□□ -0.51
LSM5-201ENST00000223084 GATA5Q9BWX5 397 aaPredicted RBP11.87□□□□□ -0.51
LSM5-201ENST00000223084 ALOXE3Q9BYJ1 711 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 KCNK13Q9HB14 408 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 PLA2G3Q9NZ20 509 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 STK38LQ9Y2H1 464 aa11.87□□□□□ -0.51
LSM5-201ENST00000223084 ASB4Q9Y574 426 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms