RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 AMER3Q8N944 861 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 DNAJB14Q8TBM8 379 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 STMN2Q93045 179 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 MACROD1Q9BQ69 325 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 IKZF5Q9H5V7 419 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 RMND5AQ9H871 391 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 NANOGQ9H9S0 305 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 THSD1Q9NS62 852 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ACTR10Q9NZ32 417 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 MCM8Q9UJA3 840 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 MAN2B2Q9Y2E5 1009 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PCDHGA4Q9Y5G9 962 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 HELZ2Q9BYK8 2649 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 C15orf38-AP3S2A0A0A6YYH1 394 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 LRIT2A6NDA9 550 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 GABRR3A8MPY1 467 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 LMO7DNF2Z398 122 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 SCAMP2O15127 329 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 ZW10O43264 779 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 CTSVO60911 334 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 FKBP9O95302 570 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 SERPIND1P05546 499 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 KLK1P06870 262 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 ANXA6P08133 673 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 LAMP1P11279 417 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 COX7A2P14406 83 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 TCN1P20061 433 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 MAGP20916 626 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 RBMS1P29558 406 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 AHRP35869 848 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 HPCAL1P37235 193 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 CDKN2CP42773 168 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 KIR3DL1P43629 444 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 FASLGP48023 281 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 GABREP78334 506 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 MC1RQ01726 317 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 PWP1Q13610 501 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 SNCBQ16143 134 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 MPEG1Q2M385 716 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 PGS1Q32NB8 556 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 GTDC1Q4AE62 458 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 OR4F3Q6IEY1 312 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 FBXO42Q6P3S6 717 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 RNF111Q6ZNA4 994 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 MSANTD1Q6ZTZ1 278 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 VN1R4Q7Z5H5 301 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 CAMKMTQ7Z624 323 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 ARPINQ7Z6K5 226 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 OOSP2Q86WS3 158 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 C10orf111Q8N326 155 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 ENDOVQ8N8Q3 282 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 TRPV3Q8NET8 790 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 OR8J2Q8NGG1 315 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 DNAJB8Q8NHS0 232 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 SNRNP27Q8WVK2 155 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 KCNE4Q8WWG9 221 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 JADE3Q92613 823 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 RSC1A1Q92681 617 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 QRFPRQ96P65 431 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 TEFMQ96QE5 360 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 PRPF18Q99633 342 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 INPP5KQ9BT40 448 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 REXO4Q9GZR2 422 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 PAIP1Q9H074 479 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 PCDHAC1Q9H158 963 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 KLHL31Q9H511 634 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 HRASLS2Q9NWW9 162 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 BCAP29Q9UHQ4 241 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 PILRAQ9UKJ1 303 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 USP22Q9UPT9 525 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 L3MBTL1Q9Y468 752 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 KLK4Q9Y5K2 254 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 AP1M2Q9Y6Q5 423 aa9.03□□□□□ -0.96
PDLIM5-223ENST00000627587 RP1P56715 2156 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 PTPRQQ9UMZ3 2332 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 ARHGAP10A1A4S6 786 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 NDUFS4O43181 175 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 TMPRSS11DO60235 418 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 CSO75390 466 aaKnown RBP9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 RPL3P39023 403 aaKnown RBP9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 RPS15AP62244 130 aaKnown RBP9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 VAC14Q08AM6 782 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 PDE7AQ13946 482 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC5A12Q1EHB4 618 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 MUM1Q2TAK8 710 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 LRIF1Q5T3J3 769 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 FAM71E1Q6IPT2 247 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 ARMC6Q6NXE6 501 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 ZCCHC8Q6NZY4 707 aaKnown RBP9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 KLHL35Q6PF15 583 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 OGFOD3Q6PK18 319 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 SPESP1Q6UW49 350 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF793Q6ZN11 406 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 ANKRD46Q86W74 232 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 TMEM132CQ8N3T6 1108 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 ARL14Q8N4G2 192 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 C16orf78Q8WTQ4 265 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 RGMAQ96B86 450 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 MIEF2Q96C03 454 aa9.02□□□□□ -0.96
PDLIM5-223ENST00000627587 COQ8BQ96D53 544 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms