RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 SLC36A3Q495N2 470 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 OR4F3Q6IEY1 312 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 ZNF283Q8N7M2 679 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 LRRC57Q8N9N7 239 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 SLC30A2Q9BRI3 323 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 FUZQ9BT04 418 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 ACTR3BQ9P1U1 418 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 FBP2O00757 339 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 INMTO95050 263 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 SPARCP09486 303 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 H2BFMP0C1H6 154 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 CD72P21854 359 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 GLT8D1Q68CQ7 371 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 LRRN1Q6UXK5 716 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 DNAJB4Q9UDY4 337 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 SRRDQ9UH36 339 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 GPR34Q9UPC5 381 aa10.77□□□□□ -0.68
CCDC144B-208ENST00000618081 KLHL33A6NCF5 533 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 WTIPA6NIX2 430 aaPredicted RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 PPM1BO75688 479 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 STATHP02808 62 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 RAC2P15153 192 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 THBS2P35442 1172 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 NRLP54845 237 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 ACTC1P68032 377 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 ACTA1P68133 377 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 KIAA1614Q5VZ46 1190 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 ZSWIM9Q86XI8 627 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 DCAF4L2Q8NA75 395 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 IRF2BPLQ9H1B7 796 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 TMEM248Q9NWD8 314 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 DNM1LO00429 736 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 TOR1BO14657 336 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 PRKD3O94806 890 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 ERP29P30040 261 aaKnown RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 LRP8Q14114 963 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 MS4A13Q5J8X5 152 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 AGTRAPQ6RW13 159 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 ESAMQ96AP7 390 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 OR2M4Q96R27 311 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 DHDHQ9UQ10 334 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 EXOSC1Q9Y3B2 195 aaKnown RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 A0A1W2PP18 115 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 ISPDA4D126 451 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 LAMTOR5O43504 91 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 TSPAN6O43657 245 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 DLDP09622 509 aaKnown RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 GSTM2P28161 218 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 RORAP35398 523 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 GPR143P51810 404 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 POU4F2Q12837 409 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 TMEM115Q12893 351 aaPredicted RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 RNF220Q5VTB9 566 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 NRROSQ86YC3 692 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 A0A0U1RQF3 1178 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 OR6C70A6NIJ9 312 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 GKN3PP0CG01 181 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 RPS15AP62244 130 aaKnown RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 CD83Q01151 205 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 TSTQ16762 297 aaKnown RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 ERN2Q76MJ5 926 aaKnown RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 ZNF584Q8IVC4 421 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 OR56A3Q8NH54 315 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 TM9SF4Q92544 642 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 LRIG1Q96JA1 1093 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 SUSD2Q9UGT4 822 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 MGAT4BQ9UQ53 548 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 CYBRD1Q53TN4 286 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 RAET1LQ5VY80 246 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 NCBP2-AS2Q69YL0 99 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 TRMT10BQ6PF06 316 aaKnown RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 PIM3Q86V86 326 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 OR10Q1Q8NGQ4 319 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 NANOS1Q8WY41 292 aaKnown RBP10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 ZBTB26Q9HCK0 441 aa10.77□□□□□ -0.69
CCDC144B-208ENST00000618081 BORCS7-ASMTA0A0B4J1R7 106 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 VSTM2BA6NLU5 285 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 H3BSH0 61 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 CREG1O75629 220 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 CD9P21926 228 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 CLCA4Q14CN2 919 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 GPRC6AQ5T6X5 926 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 NAPRTQ6XQN6 538 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 SPATC1Q76KD6 591 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 ZNF461Q8TAF7 563 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 TSGA13Q96PP4 275 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 TREX2Q9BQ50 279 aaPredicted RBP10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 CYP8B1Q9UNU6 501 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 ZNF366Q8N895 744 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 ATG5Q9H1Y0 275 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 MVB12BQ9H7P6 319 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 TM9SF3Q9HD45 589 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 LEFTY2O00292 366 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 LPLP06858 475 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 CCND3P30281 292 aaPredicted RBP10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 UQCRC1P31930 480 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 RNF111Q6ZNA4 994 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 OR2T33Q8NG76 320 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 OR4F6Q8NGB9 312 aa10.76□□□□□ -0.69
CCDC144B-208ENST00000618081 DEFB126Q9BYW3 111 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms