RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 MC1RQ01726 317 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 ILKQ13418 452 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 GRM7Q14831 915 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 NDUFA9Q16795 377 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 PGS1Q32NB8 556 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 FAM174BQ3ZCQ3 159 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 C1orf146Q5VVC0 180 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 MRM1Q6IN84 353 aaKnown RBP13.05□□□□□ -0.32
TMEM254-213ENST00000613758 IKBIPQ70UQ0 350 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 B3GNT8Q7Z7M8 397 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 PCYOX1LQ8NBM8 494 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 STARD8Q92502 1023 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 TESCQ96BS2 214 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 REEP4Q9H6H4 257 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 EXO1Q9UQ84 846 aaKnown RBP13.05□□□□□ -0.32
TMEM254-213ENST00000613758 NAALAD2Q9Y3Q0 740 aa13.05□□□□□ -0.32
TMEM254-213ENST00000613758 DYTNA2CJ06 578 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 GABRR3A8MPY1 467 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 H3BMH7 237 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ANGPT2O15123 496 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 B3GALT2O43825 422 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 GALR3O60755 368 aaPredicted RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 RFPL3O75679 317 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 KRT36O76013 467 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 PSMG1O95456 288 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 COX7A2P14406 83 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 S100A3P33764 101 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 HPCAL1P37235 193 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ITGA1P56199 1179 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 E2F1Q01094 437 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ACY1Q03154 408 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 KLC1Q07866 573 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 CCNIQ14094 377 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 UGT8Q16880 541 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 TIGD2Q4W5G0 525 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 SPANXN4Q5MJ08 99 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 GARNL3Q5VVW2 1013 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ASCL5Q7RTU5 278 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 PRSS41Q7RTY9 318 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 PDSS2Q86YH6 399 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 TTC29Q8NA56 475 aaPredicted RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 OR7A2PQ8NGA2 310 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 CCDC124Q96CT7 223 aaKnown RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ZNF501Q96CX3 271 aaPredicted RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 SLC39A3Q9BRY0 314 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 FANCEQ9HB96 536 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ANKHQ9HCJ1 492 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ENAMQ9NRM1 1142 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 TMEM181Q9P2C4 612 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 FBXW2Q9UKT8 454 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ASB4Q9Y574 426 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 SCAMP2O15127 329 aaKnown RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 GUCY1B2O75343 617 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 EMP3P54852 163 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 SRSF11Q05519 484 aaKnown RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 HEPACAMQ14CZ8 416 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 C6orf163Q5TEZ5 329 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ANKRD26P1Q6NSI1 321 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 RBM44Q6ZP01 1051 aaKnown RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 R3HCC1LQ7Z5L2 792 aaKnown RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 GPR180Q86V85 440 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 GPR135Q8IZ08 494 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 MMP21Q8N119 569 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 RNF148Q8N7C7 305 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 C10orf90Q96M02 699 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 PRPF18Q99633 342 aaKnown RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 DCLRE1BQ9H816 532 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 LYARQ9NX58 379 aaKnown RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 TEX10Q9NXF1 929 aaPredicted RBP13.04□□□□□ -0.32
TMEM254-213ENST00000613758 CD300AQ9UGN4 299 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ATP6V1HQ9UI12 483 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 ATG4BQ9Y4P1 393 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 FRYLO94915 3013 aa13.04□□□□□ -0.32
TMEM254-213ENST00000613758 H0Y3Z8 333 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 DNAJB6O75190 326 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 MED26O95402 600 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 PGRP06401 933 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 FURINP09958 794 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 PIM1P11309 404 aaPredicted RBP13.03□□□□□ -0.32
TMEM254-213ENST00000613758 CSTF2P33240 577 aaKnown RBP eCLIP13.03□□□□□ -0.32
TMEM254-213ENST00000613758 MSX2P35548 267 aaPredicted RBP13.03□□□□□ -0.32
TMEM254-213ENST00000613758 RPL3P39023 403 aaKnown RBP13.03□□□□□ -0.32
TMEM254-213ENST00000613758 PHC1P78364 1004 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 MS4A2Q01362 244 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 RUNX2Q13950 521 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 FAM53BQ14153 422 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 TRIP6Q15654 476 aaKnown RBP13.03□□□□□ -0.32
TMEM254-213ENST00000613758 DPY19L1Q2PZI1 675 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 FAM214AQ32MH5 1076 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 CPTPQ5TA50 214 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 TLDC1Q6P9B6 456 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 OR9A4Q8NGU2 314 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 LRRC58Q96CX6 371 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 COQ8BQ96D53 544 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 MTERF3Q96E29 417 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 OR6C1Q96RD1 312 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 MAPKAP1Q9BPZ7 522 aa13.03□□□□□ -0.32
TMEM254-213ENST00000613758 SH3BP4Q9P0V3 963 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms