RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	PPIE	Q9UNP9	301 aa	Known RBP	11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	MRPS33	Q9Y291	106 aa	Known RBP	11.34	□□□□□ -0.59
NUP62-223	ENST00000601665	TRBC2	A0A5B9	178 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	AHRR	A9YTQ3	701 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	NRDC	O43847	1150 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	IPO7	O95373	1038 aa	Known RBP	11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	EPPIN	O95925	133 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	CCL3	P10147	92 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	HIST1H2AD	P20671	130 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	ENDOU	P21128	410 aa	Known RBP	11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	SAT1	P21673	171 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	ARNT	P27540	789 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	PPP2R1B	P30154	601 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	CEACAM8	P31997	349 aa	Predicted RBP	11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	TIMP3	P35625	211 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	CPA2	P48052	419 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	TRPC1	P48995	793 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	WNT3	P56703	355 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	KLF1	Q13351	362 aa	Predicted RBP	11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	ACSF3	Q4G176	576 aa	Predicted RBP	11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	NEPRO	Q6NW34	567 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	PRSS57	Q6UWY2	283 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	MBOAT1	Q6ZNC8	495 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	SEM1	Q6ZVN7	128 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	PEX26	Q7Z412	305 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	CILP2	Q8IUL8	1156 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	CPNE9	Q8IYJ1	553 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	CA13	Q8N1Q1	262 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	TC2N	Q8N9U0	490 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	OR5L2	Q8NGL0	311 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	GIMAP7	Q8NHV1	300 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	SMPDL3B	Q92485	455 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	KCNJ9	Q92806	393 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	DAZL	Q92904	295 aa	Known RBP	11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	HIST1H2AH	Q96KK5	128 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	JSRP1	Q96MG2	331 aa	Predicted RBP	11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	DACH2	Q96NX9	599 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	GPR21	Q99679	349 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	CCL19	Q99731	98 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	PIP5K1A	Q99755	562 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	HIST1H2AJ	Q99878	128 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	H2AFJ	Q9BTM1	129 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	OR8D2	Q9GZM6	311 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	SLC6A15	Q9H2J7	730 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	EPB41L4B	Q9H329	900 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	PAK5	Q9P286	719 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	AMFR	Q9UKV5	643 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	ATG4B	Q9Y4P1	393 aa		11.33	□□□□□ -0.6
NUP62-223	ENST00000601665	ARHGAP21	Q5T5U3	1957 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	TCRBV7S2A1N4T	A0A589	114 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	SYNDIG1L	A6NDD5	238 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	CRLF1	O75462	422 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	IFNA2	P01563	188 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	C8G	P07360	202 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	ETS1	P14921	441 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	NPPB	P16860	134 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	TNNI3	P19429	210 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	MGAT1	P26572	445 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	RPL22	P35268	128 aa	Known RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	OPRM1	P35372	400 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	CYLC1	P35663	651 aa	Predicted RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	PIGA	P37287	484 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	AGFG1	P52594	562 aa	Known RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	HK2	P52789	917 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	HSD17B7	P56937	341 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	BASP1	P80723	227 aa	Known RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	CCZ1B	P86790	482 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	CCZ1	P86791	482 aa	Predicted RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	THOC5	Q13769	683 aa	Known RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	CSHL1	Q14406	222 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	ELAVL1	Q15717	326 aa	Known RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	BBS9	Q3SYG4	887 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	ZNF470	Q6ECI4	717 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	LRRC8E	Q6NSJ5	796 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	HMBOX1	Q6NT76	420 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	CASC4	Q6P4E1	433 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	CYHR1	Q6ZMK1	362 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	CENPU	Q71F23	418 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	STRA8	Q7Z7C7	330 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	PRUNE1	Q86TP1	453 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	GPATCH11	Q8N954	259 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	TRPV3	Q8NET8	790 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	ABHD11	Q8NFV4	315 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	NEIL3	Q8TAT5	605 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	ISL2	Q96A47	359 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	SNF8	Q96H20	258 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	KIFC1	Q9BW19	673 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	SGPP1	Q9BX95	441 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	TSGA10	Q9BZW7	698 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	ZNF703	Q9H7S9	590 aa	Predicted RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	PARVB	Q9HBI1	364 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	ZFP64	Q9NPA5	681 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	EIF2B3	Q9NR50	452 aa	Known RBP	11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	SYBU	Q9NX95	663 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	COPS7A	Q9UBW8	275 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	PDE10A	Q9Y233	779 aa		11.32	□□□□□ -0.6
NUP62-223	ENST00000601665	DHRS7	Q9Y394	339 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms