RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 C9orf16Q9BUW7 83 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 SEMA6AQ9H2E6 1030 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 GORASP2Q9H8Y8 452 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 TPT1P8Q9HAU6 139 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 SLC6A20Q9NP91 592 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 FSCN3Q9NQT6 498 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 C8orf4Q9NR00 106 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 HRASLS2Q9NWW9 162 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 SPHK1Q9NYA1 384 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 ACTR10Q9NZ32 417 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 ANKMY1Q9P2S6 941 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 GMPR2Q9P2T1 348 aaKnown RBP8.85□□□□□ -0.99
SS18-220ENST00000582092 RPS6KA6Q9UK32 745 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 PSME2Q9UL46 239 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 PADI4Q9UM07 663 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 SNX8Q9Y5X2 465 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 V9GYQ6 96 aa8.85□□□□□ -0.99
SS18-220ENST00000582092 DMXL1Q9Y485 3027 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 PRAMEF33A0A0G2JMD5 474 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 LRIT2A6NDA9 550 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 RTCAO00442 366 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 PLPP1O14494 284 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 HAT1O14929 419 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 LCMT2O60294 686 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 TPST1O60507 370 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 DEAF1O75398 565 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 CREG1O75629 220 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 C6orf47O95873 294 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 IFNA14P01570 189 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 FAM58BPP0C7Q3 252 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 RAP2AP10114 183 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 PIM1P11309 404 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 DDCP20711 480 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 TLX1P31314 330 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 GPC1P35052 558 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 BSGP35613 385 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 BCL6P41182 706 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 CDKN2CP42773 168 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 ANXA11P50995 505 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 ARHGDIAP52565 204 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 GTF2A1P52655 376 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 PHC1P78364 1004 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 MC1RQ01726 317 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 HHEXQ03014 270 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 KLC1Q07866 573 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 SLAMF1Q13291 335 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 GPR18Q14330 331 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 TRIP6Q15654 476 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 GTDC1Q4AE62 458 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 INTS11Q5TA45 600 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 OGFRL1Q5TC84 451 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 KIAA1614Q5VZ46 1190 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 FIGLAQ6QHK4 219 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 VN1R5Q7Z5H4 357 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 AMIGO2Q86SJ2 522 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 ASPGQ86U10 573 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 SERPINA11Q86U17 422 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 NRROSQ86YC3 692 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 PDSS2Q86YH6 399 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 NAXDQ8IW45 347 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 ADGRF3Q8IZF5 1079 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 CLECL1Q8IZS7 167 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 EID3Q8N140 333 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 OR2L5Q8NG80 312 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 RHBDD1Q8TEB9 315 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 OR5P2Q8WZ92 322 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 MIEF2Q96C03 454 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 C11orf24Q96F05 449 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 ZBED6CLQ96FA7 236 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 AURKBQ96GD4 344 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 CENPNQ96H22 339 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 VPS50Q96JG6 964 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 NRTNQ99748 197 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 C17orf62Q9BQA9 187 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 CCDC3Q9BQI4 270 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 SLC35A5Q9BS91 424 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 SORBS1Q9BX66 1292 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 KAT8Q9H7Z6 458 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 DDX31Q9H8H2 851 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 SERHLQ9NQF3 203 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 LYARQ9NX58 379 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 TAS2R9Q9NYW1 312 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 SLC25A37Q9NYZ2 338 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 FAF1Q9UNN5 650 aaPredicted RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 SAMD4AQ9UPU9 718 aaKnown RBP8.84□□□□□ -0.99
SS18-220ENST00000582092 ENTPD4Q9Y227 616 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 SNX11Q9Y5W9 270 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 SPACA6W5XKT8 324 aa8.84□□□□□ -0.99
SS18-220ENST00000582092 A0A0G2JN53 185 aa8.83□□□□□ -1
SS18-220ENST00000582092 A0A0J9YY10 115 aa8.83□□□□□ -1
SS18-220ENST00000582092 C5orf58C9J3I9 102 aa8.83□□□□□ -1
SS18-220ENST00000582092 BTN3A3O00478 584 aa8.83□□□□□ -1
SS18-220ENST00000582092 PRICKLE3O43900 615 aaPredicted RBP8.83□□□□□ -1
SS18-220ENST00000582092 PCDHGA12O60330 932 aa8.83□□□□□ -1
SS18-220ENST00000582092 ZNF682O95780 498 aa8.83□□□□□ -1
SS18-220ENST00000582092 EML2O95834 649 aa8.83□□□□□ -1
SS18-220ENST00000582092 EIF2S1P05198 315 aaKnown RBP8.83□□□□□ -1
SS18-220ENST00000582092 CD59P13987 128 aa8.83□□□□□ -1
SS18-220ENST00000582092 UQCRBP14927 111 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms