RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 PCDHGB5Q9Y5G0 923 aa5.42□□□□□ -1.54
CCDC178-209ENST00000579947 ANKRD62A6NC57 917 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 TRIM3O75382 744 aaPredicted RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 CDC123O75794 336 aaPredicted RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 RPN2P04844 631 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 RNASE1P07998 156 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 EZRP15311 586 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 HK2P52789 917 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PMS1P54277 932 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 ZNF844Q08AG5 666 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 BRICD5Q6PL45 260 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 DCUN1D3Q8IWE4 304 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 BPIFB2Q8N4F0 458 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 CNEP1R1Q8N9A8 125 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PEX11GQ96HA9 241 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 ACTR6Q9GZN1 396 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 UBQLN3Q9H347 655 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 CNIH4Q9P003 139 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 HACD3Q9P035 362 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 GRIP1Q9Y3R0 1128 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PPIAL4AQ9Y536 164 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 A0A1W2PPV9 198 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 C2orf72A6NCS6 295 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 SHISA9B4DS77 424 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 F13A1P00488 732 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 KNG1P01042 644 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PKMP14618 531 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PAMP19021 973 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 TTKP33981 857 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 CDH11P55287 796 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 DIEXFQ68CQ4 756 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 STAC2Q6ZMT1 411 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 POLNQ7Z5Q5 900 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 GRAMD2AQ8IUY3 354 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 IMP4Q96G21 291 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 ZNF597Q96LX8 424 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 FOXN4Q96NZ1 517 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 COPS8Q99627 209 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PTBP2Q9UKA9 531 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PROCRQ9UNN8 238 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 GPR52Q9Y2T5 361 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PKP3Q9Y446 797 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 FKBP7Q9Y680 259 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 CADP27708 2225 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 NOTCH3Q9UM47 2321 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 COL7A1Q02388 2944 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 LRP5LA4QPB2 252 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 GFYI3L273 518 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 WWP2O00308 870 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 RDH16O75452 317 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 SRP72O76094 671 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 AP2A2O94973 939 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 CYP1A2P05177 515 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PNMA6AP0CW24 399 aaPredicted RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 FUT7Q11130 342 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 IFI16Q16666 785 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 ZNF791Q3KP31 576 aaPredicted RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 ZNF425Q6IV72 752 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 CCDC70Q6NSX1 233 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 TMEM214Q6NUQ4 689 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 TBC1D20Q96BZ9 403 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 CTHRC1Q96CG8 243 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 PTCHD1Q96NR3 888 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 LIN28AQ9H9Z2 209 aaKnown RBP5.41□□□□□ -1.54
CCDC178-209ENST00000579947 ANKHQ9HCJ1 492 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 FANCFQ9NPI8 374 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 SLC39A10Q9ULF5 831 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 C15orf41Q9Y2V0 281 aa5.41□□□□□ -1.54
CCDC178-209ENST00000579947 C5orf63A6NC05 138 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 B4DSR2 109 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 YEATS4O95619 227 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 TGM6O95932 706 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 MMEP08473 750 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 DEKP35659 375 aaKnown RBP5.4□□□□□ -1.54
CCDC178-209ENST00000579947 NAGLUP54802 743 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 TYRO3Q06418 890 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 PDSS2Q86YH6 399 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 DND1Q8IYX4 353 aaKnown RBP5.4□□□□□ -1.54
CCDC178-209ENST00000579947 FAM110DQ8TAY7 271 aaPredicted RBP5.4□□□□□ -1.54
CCDC178-209ENST00000579947 PRDM9Q9NQV7 894 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 GAR1Q9NY12 217 aaKnown RBP5.4□□□□□ -1.54
CCDC178-209ENST00000579947 ZDHHC3Q9NYG2 299 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 UTP6Q9NYH9 597 aaKnown RBP5.4□□□□□ -1.54
CCDC178-209ENST00000579947 CRLS1Q9UJA2 301 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 CNOT11Q9UKZ1 510 aaKnown RBP5.4□□□□□ -1.54
CCDC178-209ENST00000579947 RUVBL2Q9Y230 463 aaKnown RBP5.4□□□□□ -1.54
CCDC178-209ENST00000579947 DLGAP4Q9Y2H0 992 aa5.4□□□□□ -1.54
CCDC178-209ENST00000579947 PLXNB1O43157 2135 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 DNAJC9-AS1A6NH13 148 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 A8MUA0 341 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 TRAPPC6AO75865 159 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 ACSL3O95573 720 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 PRSS56P0CW18 603 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 IL1RNP18510 177 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 PTNP21246 168 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 GIFP27352 417 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 GCKP35557 465 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 BSPH1Q075Z2 132 aa5.4□□□□□ -1.55
CCDC178-209ENST00000579947 HLXQ14774 488 aaPredicted RBP5.4□□□□□ -1.55
CCDC178-209ENST00000579947 DPYSL2Q16555 572 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms