RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 UGDHO60701 494 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 KRT38O76015 456 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 COL6A2P12110 1019 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 EPB42P16452 691 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 TPP2P29144 1249 aaPredicted RBP16.17■□□□□ 0.18
SMG6-212ENST00000573153 HSD17B7P56937 341 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 KCNK10P57789 538 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 MLF1P58340 268 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 TERF2Q15554 542 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 OR1C1Q15619 314 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 ZNF766Q5HY98 468 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 TECRLQ5HYJ1 363 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 SPINK14Q6IE38 97 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 GRHL2Q6ISB3 625 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 TRIM40Q6P9F5 258 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 CHERPQ8IWX8 916 aaKnown RBP16.17■□□□□ 0.18
SMG6-212ENST00000573153 IFT20Q8IY31 132 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 FAM47BQ8NA70 645 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 SRFBP1Q8NEF9 429 aaKnown RBP16.17■□□□□ 0.18
SMG6-212ENST00000573153 FRMD6Q96NE9 622 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 SERINC2Q96SA4 455 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 ROGDIQ9GZN7 287 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 ZNF358Q9NW07 568 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 ADGRE2Q9UHX3 823 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 OSGIN2Q9Y236 505 aa16.17■□□□□ 0.18
SMG6-212ENST00000573153 TNPO3Q9Y5L0 923 aaKnown RBP16.17■□□□□ 0.18
SMG6-212ENST00000573153 A8MUA0 341 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 RTCAO00442 366 aaKnown RBP16.16■□□□□ 0.18
SMG6-212ENST00000573153 B3GALT2O43825 422 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 RASAL1O95294 804 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 TRHRP34981 398 aaPredicted RBP16.16■□□□□ 0.18
SMG6-212ENST00000573153 MTTPP55157 894 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 ACTN3Q08043 901 aaPredicted RBP16.16■□□□□ 0.18
SMG6-212ENST00000573153 TGM3Q08188 693 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 PFKFB4Q16877 469 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 TMEM35AQ53FP2 167 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 LIPJQ5W064 366 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 MED27Q6P2C8 311 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 TRMT10CQ7L0Y3 403 aaKnown RBP16.16■□□□□ 0.18
SMG6-212ENST00000573153 RPS19BP1Q86WX3 136 aaKnown RBP16.16■□□□□ 0.18
SMG6-212ENST00000573153 SIAH3Q8IW03 269 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 OR7G3Q8NG95 312 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 CCT6BQ92526 530 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 TRIM44Q96DX7 344 aaPredicted RBP16.16■□□□□ 0.18
SMG6-212ENST00000573153 MAGEB10Q96LZ2 347 aaPredicted RBP16.16■□□□□ 0.18
SMG6-212ENST00000573153 KCNC2Q96PR1 638 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 TBCDQ9BTW9 1192 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 CDCP1Q9H5V8 836 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 LYRM4Q9HD34 91 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 TMCO1Q9UM00 188 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 NFU1Q9UMS0 254 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 IKBKGQ9Y6K9 419 aa16.16■□□□□ 0.18
SMG6-212ENST00000573153 RBP1P09455 135 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 SBK3P0C264 359 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 GFAPP14136 432 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 COL8A1P27658 744 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 PIK3CBP42338 1070 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 MSH2P43246 934 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 PIK3CGP48736 1102 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 ARFIP1P53367 373 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 TSNAXIP1Q2TAA8 658 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 RNFT1Q5M7Z0 435 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 ZNF595Q8IYB9 648 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 CNPY4Q8N129 248 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 SLC5A8Q8N695 610 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 ARMC2Q8NEN0 867 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 B3GNT7Q8NFL0 401 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 RELTQ969Z4 430 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 C5orf34Q96MH7 638 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 MAPKAP1Q9BPZ7 522 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 SORBS1Q9BX66 1292 aaKnown RBP16.15■□□□□ 0.18
SMG6-212ENST00000573153 TXLNGYQ9BZA5 131 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 VPS11Q9H270 941 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 PRTFDC1Q9NRG1 225 aa16.15■□□□□ 0.18
SMG6-212ENST00000573153 H0YIV9 168 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 LRRTM2O43300 516 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 SIX3O95343 332 aaPredicted RBP16.14■□□□□ 0.17
SMG6-212ENST00000573153 ETHE1O95571 254 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 MYBL2P10244 700 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 ATP5A1P25705 553 aaKnown RBP16.14■□□□□ 0.17
SMG6-212ENST00000573153 GCAP28676 217 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 RCN2Q14257 317 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 FAM219BQ5XKK7 198 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 TIFABQ6ZNK6 161 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 MAMDC2Q7Z304 686 aaPredicted RBP16.14■□□□□ 0.17
SMG6-212ENST00000573153 CYP4X1Q8N118 509 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 TMEM151AQ8N4L1 468 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 TEX9Q8N6V9 391 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 ACOT4Q8N9L9 421 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 EIF1ADQ8N9N8 165 aaKnown RBP16.14■□□□□ 0.17
SMG6-212ENST00000573153 L3MBTL4Q8NA19 623 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 DNAJB8Q8NHS0 232 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 ANKRD9Q96BM1 317 aaPredicted RBP16.14■□□□□ 0.17
SMG6-212ENST00000573153 CMTM7Q96FZ5 175 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 UTP23Q9BRU9 249 aaKnown RBP16.14■□□□□ 0.17
SMG6-212ENST00000573153 PSD3Q9NYI0 1048 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 FETUBQ9UGM5 382 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 PPT2Q9UMR5 302 aa16.14■□□□□ 0.17
SMG6-212ENST00000573153 MRPS33Q9Y291 106 aaKnown RBP16.14■□□□□ 0.17
SMG6-212ENST00000573153 PCDHGA11Q9Y5H2 935 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms