RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 TBC1D19Q8N5T2 526 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 TRPV3Q8NET8 790 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 PHF10Q8WUB8 498 aaKnown RBP9.44□□□□□ -0.9
SNX29-202ENST00000563308 ASB5Q8WWX0 329 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 PTCHD1Q96NR3 888 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 AIF1LQ9BQI0 150 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 GPATCH1Q9BRR8 931 aaKnown RBP9.44□□□□□ -0.9
SNX29-202ENST00000563308 ERP44Q9BS26 406 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 TMEM79Q9BSE2 394 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 DERL2Q9GZP9 239 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 CAB39LQ9H9S4 337 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 NECTIN3Q9NQS3 549 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 ANKRD10Q9NXR5 420 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 RNF14Q9UBS8 474 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 CTNNAL1Q9UBT7 734 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 PPT2Q9UMR5 302 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 KCNE2Q9Y6J6 123 aa9.44□□□□□ -0.9
SNX29-202ENST00000563308 INTS1Q8N201 2190 aaKnown RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 TCRBV9S1A1TA0A576 114 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 LRIT2A6NDA9 550 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 FAM159BA6NKW6 160 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 GABRR3A8MPY1 467 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 TGFBR3LH3BV60 316 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 PHGDHO43175 533 aaKnown RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 RAD51CO43502 376 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 WDR47O94967 919 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 C1GALT1C1LP0DN25 315 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 RNH1P13489 461 aaKnown RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 ABOP16442 354 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 BMP7P18075 431 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 GNAZP19086 355 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 EPORP19235 508 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 JAK1P23458 1154 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 HNRNPH1P31943 449 aaKnown RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 GGT5P36269 586 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 GMPRP36959 345 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 PAFAH1B1P43034 410 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 KCNC1P48547 511 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 GPX6P59796 221 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 SKP1P63208 163 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 POU4F1Q01851 419 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 RUNX2Q13950 521 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 RBBP5Q15291 538 aaKnown RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 TGFBIQ15582 683 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 OR4D1Q15615 310 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 ADPRMQ3LIE5 342 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 TOR1AIP1Q5JTV8 583 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 RNFT1Q5M7Z0 435 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 ADNP2Q6IQ32 1131 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 NIPAL1Q6NVV3 410 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 CAPN12Q6ZSI9 719 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 CYS1Q717R9 158 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 RPS19BP1Q86WX3 136 aaKnown RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 SIAH3Q8IW03 269 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 CHERPQ8IWX8 916 aaKnown RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 SCUBE1Q8IWY4 988 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.43□□□□□ -0.9
SNX29-202ENST00000563308 TMEM52Q8NDY8 209 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 SPATA4Q8NEY3 305 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 SUN3Q8TAQ9 357 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 MS4A6EQ96DS6 147 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 UBXN10Q96LJ8 280 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 QRFPRQ96P65 431 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 GPR22Q99680 433 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 EGFL8Q99944 293 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 UTP23Q9BRU9 249 aaKnown RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 DPH5Q9H2P9 285 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 CDCP1Q9H5V8 836 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 TRIM45Q9H8W5 580 aaPredicted RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 SAYSD1Q9NPB0 183 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 PRDM9Q9NQV7 894 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 KLHL1Q9NR64 748 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 NSMCE4AQ9NXX6 385 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 WHRNQ9P202 907 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 ZNF490Q9ULM2 529 aaPredicted RBP9.43□□□□□ -0.9
SNX29-202ENST00000563308 ASB1Q9Y576 335 aa9.43□□□□□ -0.9
SNX29-202ENST00000563308 FAM187AA6NFU0 413 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 NCF1BA6NI72 391 aaPredicted RBP9.42□□□□□ -0.9
SNX29-202ENST00000563308 SAGE2PA6NJ88 616 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 FAM90A27PA6NNH2 459 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 NCF1CA8MVU1 366 aaPredicted RBP9.42□□□□□ -0.9
SNX29-202ENST00000563308 NDC80O14777 642 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 EIF3HO15372 352 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNX29-202ENST00000563308 SP1P08047 785 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 CCDC166P0CW27 439 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 NCF1P14598 390 aaPredicted RBP9.42□□□□□ -0.9
SNX29-202ENST00000563308 CD1DP15813 335 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 CD22P20273 847 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 TPP2P29144 1249 aaPredicted RBP9.42□□□□□ -0.9
SNX29-202ENST00000563308 TRHRP34981 398 aaPredicted RBP9.42□□□□□ -0.9
SNX29-202ENST00000563308 GPR143P51810 404 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 HNRNPFP52597 415 aaKnown RBP9.42□□□□□ -0.9
SNX29-202ENST00000563308 MLF1P58340 268 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 BTN3A2P78410 334 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 SLBPQ14493 270 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNX29-202ENST00000563308 PCBP2Q15366 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNX29-202ENST00000563308 TRADDQ15628 312 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 ZKSCAN8Q15776 578 aaPredicted RBP9.42□□□□□ -0.9
SNX29-202ENST00000563308 FBXO48Q5FWF7 155 aa9.42□□□□□ -0.9
SNX29-202ENST00000563308 CDKL4Q5MAI5 379 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms