RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ZNF19P17023 458 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 HNRNPA2B1P22626 353 aaKnown RBP12.96□□□□□ -0.34
TRAF3-208ENST00000560371 OTX2P32243 289 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 CD70P32970 193 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 SLC15A1P46059 708 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 GPX6P59796 221 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 EIF2S3LQ2VIR3 472 aaKnown RBP12.96□□□□□ -0.34
TRAF3-208ENST00000560371 OR4C15Q8NGM1 316 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 RHEBL1Q8TAI7 183 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 TM9SF2Q99805 663 aa12.96□□□□□ -0.34
TRAF3-208ENST00000560371 KAT8Q9H7Z6 458 aaKnown RBP12.96□□□□□ -0.34
TRAF3-208ENST00000560371 TIMM8BQ9Y5J9 83 aaPredicted RBP12.96□□□□□ -0.34
TRAF3-208ENST00000560371 IGKV6D-21A0A0A0MT36 114 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 METTL21EPA6NDL7 271 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 INMTO95050 263 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 UQCRC2P22695 453 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 NAXEQ8NCW5 288 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 C9orf43Q8TAL5 461 aaPredicted RBP12.95□□□□□ -0.34
TRAF3-208ENST00000560371 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 OR1F2PQ96R84 312 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 GFM1Q96RP9 751 aaKnown RBP12.95□□□□□ -0.34
TRAF3-208ENST00000560371 HSPA12AO43301 675 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 NPTX1Q15818 432 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 OR10Q1Q8NGQ4 319 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 TOP1MTQ969P6 601 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF639Q9UID6 485 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 PSAT1Q9Y617 370 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 DIRAS1O95057 198 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 H6PDO95479 791 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 WDR5P61964 334 aaKnown RBP12.95□□□□□ -0.34
TRAF3-208ENST00000560371 MERTKQ12866 999 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 TRAM2Q15035 370 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 MRPL10Q7Z7H8 261 aaKnown RBP12.95□□□□□ -0.34
TRAF3-208ENST00000560371 KCTD7Q96MP8 289 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 NPLQ9BXD5 320 aaPredicted RBP12.95□□□□□ -0.34
TRAF3-208ENST00000560371 UCK2Q9BZX2 261 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 EBF2Q9HAK2 575 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 E7EQ34 232 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 AQP4P55087 323 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 PCLAFQ15004 111 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 TPRG1LQ5T0D9 272 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 GATSQ8NAP1 163 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 LMO3Q8TAP4 145 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 NAT14Q8WUY8 206 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 BORCS6Q96GS4 357 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 HERPUD2Q9BSE4 406 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 STOML2Q9UJZ1 356 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 ZNF878C9JN71 531 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 BPNT1O95861 308 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 IFI30P13284 250 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 HMGCLP35914 325 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 LEPRP48357 1165 aaKnown RBP12.95□□□□□ -0.34
TRAF3-208ENST00000560371 CSTF1Q05048 431 aaKnown RBP12.95□□□□□ -0.34
TRAF3-208ENST00000560371 NNATQ16517 81 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 CYBRD1Q53TN4 286 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 RAB43Q86YS6 212 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 TCEAL8Q8IYN2 117 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 OR2L8Q8NGY9 312 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 LINC00597Q9H2U6 94 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 PEX16Q9Y5Y5 336 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 A0A1W2PRQ8 180 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 CIB4A0PJX0 185 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 FEZF1A0PJY2 475 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 PDLIM1O00151 329 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 SCO2O43819 266 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 CSN2P05814 226 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 GADD45AP24522 165 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 DEFB103AP81534 67 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 C1orf189Q5VU69 101 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 EPGNQ6UW88 154 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 NR4A3Q92570 626 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 TRIM36Q9NQ86 728 aa12.95□□□□□ -0.34
TRAF3-208ENST00000560371 SLC6A6P31641 620 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 FOXK1P85037 733 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 SCAPQ12770 1279 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 NFE2L1Q14494 772 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 GRM7Q14831 915 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 TTLL10Q6ZVT0 673 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 WDTC1Q8N5D0 677 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 TMEM74Q96NL1 305 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 C11orf98E9PRG8 122 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 TLX2O43763 284 aaPredicted RBP12.94□□□□□ -0.34
TRAF3-208ENST00000560371 KCNJ13O60928 360 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 OR12D1P0DN82 309 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 RORAP35398 523 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 CTBP2P56545 445 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 SLC18A2Q05940 514 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 DGLUCYQ7Z3D6 616 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 TRIB3Q96RU7 358 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 TSSK6Q9BXA6 273 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 PPP4R1LQ9P1A2 415 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 GNG8Q9UK08 70 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 ITGB1P05556 798 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 LRRC25Q8N386 305 aaPredicted RBP12.94□□□□□ -0.34
TRAF3-208ENST00000560371 ZDHHC1Q8WTX9 485 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 MNTQ99583 582 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 MCHR1Q99705 422 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 TIMMDC1Q9NPL8 285 aa12.94□□□□□ -0.34
TRAF3-208ENST00000560371 M0QZQ0 153 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms