RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PRPS1L1P21108 318 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 AGXTP21549 392 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 UGT1A1P22309 533 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 UGT1A4P22310 534 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 AHCYP23526 432 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 RPA1P27694 616 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 LAP3P28838 519 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TACR3P29371 465 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 UGT1A3P35503 534 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 UGT1A5P35504 534 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 GPX4P36969 197 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TAGLN2P37802 199 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 FEN1P39748 380 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PRKCIP41743 596 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 NR4A2P43354 598 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 GNPDA1P46926 289 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 SERPINH1P50454 418 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 METAP2P50579 478 aaKnown RBP eCLIP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 NDUFA8P51970 172 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 NDST1P52848 882 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TIMM10P62072 90 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 DEFB103AP81534 67 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PUDPQ08623 228 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF844Q08AG5 666 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ILF3Q12906 894 aaKnown RBP eCLIP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ITGADQ13349 1161 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 KRR1Q13601 381 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ALKBH1Q13686 389 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CAMK1Q14012 370 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 EFR3AQ14156 821 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 FGL2Q14314 439 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 LASP1Q14847 261 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TRAM2Q15035 370 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 KARSQ15046 597 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 SEC23BQ15437 767 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 AASDHQ4L235 1098 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TMEM119Q4V9L6 283 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 LRRC24Q50LG9 513 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 GPAT3Q53EU6 434 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ARMCX4Q5H9R4 360 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 MTX3Q5HYI7 312 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PAGE2BQ5JRK9 111 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 C10orf120Q5SQS8 335 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF618Q5T7W0 954 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CES4AQ5XG92 561 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 MSANTD2Q6P1R3 559 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TTC27Q6P3X3 843 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 NOTUMQ6P988 496 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 BRAT1Q6PJG6 821 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 METAP1DQ6UB28 335 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CXCL17Q6UXB2 119 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 NPSR1Q6W5P4 371 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF782Q6ZMW2 699 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CYB5R4Q7L1T6 521 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 SNX20Q7Z614 316 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TAF8Q7Z7C8 310 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ANKRD46Q86W74 232 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TRIM69Q86WT6 500 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 SLC13A5Q86YT5 568 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ARMC8Q8IUR7 673 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CHERPQ8IWX8 916 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CFAP52Q8N1V2 620 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CLIP4Q8N3C7 705 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 HDDC3Q8N4P3 179 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 MYCT1Q8N699 235 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 AOPEPQ8N6M6 819 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ANKRD52Q8NB46 1076 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 KDM1BQ8NB78 822 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 Q8NFD4 153 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CMASQ8NFW8 434 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 OR2L3Q8NG85 312 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 OR7G3Q8NG95 312 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 OR6Y1Q8NGX8 325 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 OR10J5Q8NHC4 309 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 LIPHQ8WWY8 451 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ASB12Q8WXK4 309 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ESR2Q92731 530 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TLCD1Q96CP7 247 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 REPS1Q96D71 796 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ELP4Q96EB1 424 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF597Q96LX8 424 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 PPP3R2Q96LZ3 170 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF347Q96SE7 839 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TCEAL7Q9BRU2 100 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 BTBD10Q9BSF8 475 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 COPS4Q9BT78 406 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 TRAF4Q9BUZ4 470 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 NPLQ9BXD5 320 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 WWP1Q9H0M0 922 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 OR10A4Q9H209 315 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 FOXP1Q9H334 677 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ASB8Q9H765 288 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 MRPL44Q9H9J2 332 aaKnown RBP4.23□□□□□ -1.73
ATXN3-227ENST00000554491 UGT1A7Q9HAW7 530 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 UGT1A10Q9HAW8 530 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 UGT1A8Q9HAW9 530 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 CYP3A43Q9HB55 503 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 ASCL3Q9NQ33 180 aa4.23□□□□□ -1.73
ATXN3-227ENST00000554491 BIN3Q9NQY0 253 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms