RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 FRMD6Q96NE9 622 aa11.1□□□□□ -0.63
TRAPPC6B-204ENST00000554018 SERINC2Q96SA4 455 aa11.1□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ATOH8Q96SQ7 321 aa11.1□□□□□ -0.63
TRAPPC6B-204ENST00000554018 CSF3RQ99062 836 aa11.1□□□□□ -0.63
TRAPPC6B-204ENST00000554018 PRDM7Q9NQW5 492 aa11.1□□□□□ -0.63
TRAPPC6B-204ENST00000554018 NPIPA1Q9UND3 350 aa11.1□□□□□ -0.63
TRAPPC6B-204ENST00000554018 OTOGQ6ZRI0 2925 aa11.1□□□□□ -0.63
TRAPPC6B-204ENST00000554018 NINQ8N4C6 2090 aa11.1□□□□□ -0.63
TRAPPC6B-204ENST00000554018 HMX2A2RU54 273 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 CLDN4O14493 209 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ZNHIT1O43257 154 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 NME2P1O60361 137 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 SLC19A2O60779 497 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 KERAO60938 352 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 LTA4HP09960 611 aaKnown RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 NME2P22392 152 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 HPDP32754 393 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 CA7P43166 264 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 MSH2P43246 934 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 CLCN2P51788 898 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 GPR143P51810 404 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 IRF9Q00978 393 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 RBPJQ06330 500 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 TGM3Q08188 693 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 NAB1Q13506 487 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 BMPR2Q13873 1038 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 TERF2Q15554 542 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 RNFT1Q5M7Z0 435 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 UBAP2Q5T6F2 1119 aaKnown RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 MROH9Q5TGP6 573 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ZNF793Q6ZN11 406 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 C16orf47Q6ZP98 133 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 SIAH3Q8IW03 269 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ZNF595Q8IYB9 648 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 CENPLQ8N0S6 344 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ARMC10Q8N2F6 343 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 CPSF7Q8N684 471 aaKnown RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 UBTD2Q8WUN7 234 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 KCTD4Q8WVF5 259 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ITLN2Q8WWU7 325 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 SREK1Q8WXA9 508 aaKnown RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 NCLNQ969V3 563 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 VMP1Q96GC9 406 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 CCDC120Q96HB5 630 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 GPR137Q96N19 417 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 LRRC1Q9BTT6 524 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 MS4A8Q9BY19 250 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 TRIM45Q9H8W5 580 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 COPS7BQ9H9Q2 264 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 PRM3Q9NNZ6 103 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ZDHHC18Q9NUE0 388 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 KCMF1Q9P0J7 381 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 SUCOQ9UBS9 1254 aaKnown RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ZNF223Q9UK11 482 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 FBXW2Q9UKT8 454 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 DAPP1Q9UN19 280 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 PPIEQ9UNP9 301 aaKnown RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 MRPS33Q9Y291 106 aaKnown RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 ACOT9Q9Y305 439 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 MAP1AP78559 2803 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 AKAP9Q99996 3911 aa11.09□□□□□ -0.63
TRAPPC6B-204ENST00000554018 CCDC168Q8NDH2 2452 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 CELSR1Q9NYQ6 3014 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 K7EPI3 171 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 SAP18O00422 153 aaKnown RBP11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 RTCAO00442 366 aaKnown RBP11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 CDK2AP1O14519 115 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 FCHO1O14526 889 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 PRKNO60260 465 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 CTNSO60931 367 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 IFNA16P05015 189 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 PCNAP12004 261 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 MTHFD2P13995 350 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 CKAP4Q07065 602 aaKnown RBP11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 E2F2Q14209 437 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 C3AR1Q16581 482 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 KRTCAP3Q53RY4 240 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 C8orf74Q6P047 294 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 RNF175Q8N4F7 328 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 ACOT4Q8N9L9 421 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 FAM98AQ8NCA5 519 aaKnown RBP11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 ADAMTS18Q8TE60 1221 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 ZNF473Q8WTR7 871 aaKnown RBP11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 UBE2E3Q969T4 207 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 KCNC2Q96PR1 638 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 MAPKAP1Q9BPZ7 522 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 TBCDQ9BTW9 1192 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 ADAP2Q9NPF8 381 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 OPTCQ9UBM4 332 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 TINAGQ9UJW2 476 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 CSMD2Q7Z408 3487 aa11.08□□□□□ -0.64
TRAPPC6B-204ENST00000554018 INTS1Q8N201 2190 aaKnown RBP11.07□□□□□ -0.64
TRAPPC6B-204ENST00000554018 A0A087X1B8 175 aa11.07□□□□□ -0.64
TRAPPC6B-204ENST00000554018 ARHGAP10A1A4S6 786 aa11.07□□□□□ -0.64
TRAPPC6B-204ENST00000554018 PRSS44E7EML9 344 aa11.07□□□□□ -0.64
TRAPPC6B-204ENST00000554018 ASNA1O43681 348 aa11.07□□□□□ -0.64
TRAPPC6B-204ENST00000554018 ITGA10O75578 1167 aa11.07□□□□□ -0.64
TRAPPC6B-204ENST00000554018 ZFAND5O76080 213 aa11.07□□□□□ -0.64
TRAPPC6B-204ENST00000554018 MLYCDO95822 493 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms