RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 SIX3O95343 332 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-209ENST00000551008 UQCRHP07919 91 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 ATP5A1P25705 553 aaKnown RBP12.16□□□□□ -0.46
NPAS3-209ENST00000551008 COL8A1P27658 744 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 GCAP28676 217 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 MTTPP55157 894 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 UAP1Q16222 522 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-209ENST00000551008 C4orf17Q53FE4 359 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 GRHL2Q6ISB3 625 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 TRIM40Q6P9F5 258 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 CLNKQ7Z7G1 428 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 RPS19BP1Q86WX3 136 aaKnown RBP12.16□□□□□ -0.46
NPAS3-209ENST00000551008 SLC5A8Q8N695 610 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 TEX9Q8N6V9 391 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 ACOT4Q8N9L9 421 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 LRRN4CLQ8ND94 238 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 B3GNT7Q8NFL0 401 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 DCAKDQ8WVC6 231 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 FMO2Q99518 471 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 MAPKAP1Q9BPZ7 522 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 TRIM45Q9H8W5 580 aaPredicted RBP12.16□□□□□ -0.46
NPAS3-209ENST00000551008 KLHL1Q9NR64 748 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 EXPH5Q8NEV8 1989 aa12.16□□□□□ -0.46
NPAS3-209ENST00000551008 NCKAP5O14513 1909 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 TRBV11-1A0A0K0K1C0 115 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 SAP18O00422 153 aaKnown RBP12.15□□□□□ -0.46
NPAS3-209ENST00000551008 LRRTM2O43300 516 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 MYO1DO94832 1006 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 ETHE1O95571 254 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 TGFB1P01137 390 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 S100BP04271 92 aaPredicted RBP12.15□□□□□ -0.46
NPAS3-209ENST00000551008 SBK3P0C264 359 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 SERPINB8P50452 374 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 HSD17B7P56937 341 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 LAPTM5Q13571 262 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 ELOAQ14241 798 aaKnown RBP12.15□□□□□ -0.46
NPAS3-209ENST00000551008 ACAP2Q15057 778 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 PCBP2Q15366 365 aaKnown RBP eCLIP12.15□□□□□ -0.46
NPAS3-209ENST00000551008 TERF2Q15554 542 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 PFKFB4Q16877 469 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 PAGE2BQ5JRK9 111 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 RNFT1Q5M7Z0 435 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 C1QL3Q5VWW1 255 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 MED27Q6P2C8 311 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 C16orf47Q6ZP98 133 aaPredicted RBP12.15□□□□□ -0.46
NPAS3-209ENST00000551008 CCDC91Q7Z6B0 441 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 SIAH3Q8IW03 269 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 CHERPQ8IWX8 916 aaKnown RBP12.15□□□□□ -0.46
NPAS3-209ENST00000551008 ZNF595Q8IYB9 648 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 TMEM151AQ8N4L1 468 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 ZNF321PQ8N8H1 164 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 HUS1BQ8NHY5 278 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 UHMK1Q8TAS1 419 aaKnown RBP12.15□□□□□ -0.46
NPAS3-209ENST00000551008 ANKRD9Q96BM1 317 aaPredicted RBP12.15□□□□□ -0.46
NPAS3-209ENST00000551008 FAR2Q96K12 515 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 C5orf34Q96MH7 638 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 PAFAH2Q99487 392 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 UTP23Q9BRU9 249 aaKnown RBP12.15□□□□□ -0.46
NPAS3-209ENST00000551008 OR51B5Q9H339 312 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 ZBTB26Q9HCK0 441 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 DMRT3Q9NQL9 472 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 TSC22D4Q9Y3Q8 395 aa12.15□□□□□ -0.46
NPAS3-209ENST00000551008 A0A1B0GTL3 188 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 PLPP1O14494 284 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 OR7A17O14581 309 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 LDB3O75112 727 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 SP1P08047 785 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 CTAGE8P0CG41 777 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 PCNAP12004 261 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 HIST1H1TP22492 207 aaPredicted RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 TYK2P29597 1187 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 TRHRP34981 398 aaPredicted RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 ALDH18A1P54886 795 aaKnown RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 TAS2R50P59544 299 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 FAM83EQ2M2I3 478 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 DEPDC1Q5TB30 811 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 KHDRBS2Q5VWX1 349 aaKnown RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 MAMDC2Q7Z304 686 aaPredicted RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 GALNTL5Q7Z4T8 443 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 GOLGA7Q7Z5G4 137 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 CTAGE4Q8IX94 777 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 DNAJB8Q8NHS0 232 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 WDR20Q8TBZ3 569 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 ADAMTS18Q8TE60 1221 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 THAP3Q8WTV1 239 aaPredicted RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 PTPMT1Q8WUK0 201 aaPredicted RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 IFT81Q8WYA0 676 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 NCLNQ969V3 563 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 NSUN5Q96P11 429 aaKnown RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 KCNC2Q96PR1 638 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 TBCDQ9BTW9 1192 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 TSPAN10Q9H1Z9 355 aaPredicted RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 VPS11Q9H270 941 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 EPB41L4BQ9H329 900 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 LYRM4Q9HD34 91 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 ADAP2Q9NPF8 381 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 PNO1Q9NRX1 252 aaKnown RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 LRFN1Q9P244 771 aa12.14□□□□□ -0.47
NPAS3-209ENST00000551008 MTRF1LQ9UGC7 380 aaKnown RBP12.14□□□□□ -0.47
NPAS3-209ENST00000551008 RNF11Q9Y3C5 154 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms