RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 CCR5P51681 352 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 VLDLRP98155 873 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 TJAP1Q5JTD0 557 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 TOR1AIP1Q5JTV8 583 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 NDUFAF5Q5TEU4 345 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 FBXO42Q6P3S6 717 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 ABHD17CQ6PCB6 329 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 LPCAT2Q7L5N7 544 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 PAQR7Q86WK9 346 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 OFCC1Q8IZS5 231 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 MFSD2AQ8NA29 543 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 TPD52L3Q96J77 140 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 ADI1Q9BV57 179 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 EVA1BQ9NVM1 165 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 THEGQ9P2T0 379 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 MAPRE3Q9UPY8 281 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 AP1M2Q9Y6Q5 423 aa16.4■□□□□ 0.22
TMEM50B-210ENST00000542230 A0A1W2PPC4 97 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 TNFP01375 233 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 WNT1P04628 370 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 CHI3L1P36222 383 aaPredicted RBP16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 CDK9P50750 372 aaKnown RBP16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 ABATP80404 500 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 TXNL4AP83876 142 aaKnown RBP16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 MERTKQ12866 999 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 SLAMF1Q13291 335 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 C18orf63Q68DL7 685 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 GPR153Q6NV75 609 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 TAF8Q7Z7C8 310 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 ACOT4Q8N9L9 421 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 SLC37A2Q8TED4 501 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 MTERF3Q96E29 417 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 HSH2DQ96JZ2 352 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 PITHD1Q9GZP4 211 aaPredicted RBP16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 C1GALT1Q9NS00 363 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 CPNE7Q9UBL6 633 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 DNAJB9Q9UBS3 223 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 FBXW2Q9UKT8 454 aa16.39■□□□□ 0.21
TMEM50B-210ENST00000542230 A0A1W2PR48 441 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 CHURC1-FNTBB4DL54 471 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 FAM58BPP0C7Q3 252 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 UGT2B7P16662 529 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 MANFP55145 182 aaKnown RBP16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 DUSP2Q05923 314 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 ADPRMQ3LIE5 342 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 CYBRD1Q53TN4 286 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 ZDHHC21Q8IVQ6 265 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 TRIM48Q8IWZ4 208 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 NFKBIDQ8NI38 313 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 TMEM74BQ9NUR3 256 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 OLAHQ9NV23 265 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 CCDC88CQ9P219 2028 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 A0A0J9YVX5 310 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 GNGT2O14610 69 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 P2RX6O15547 441 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 SEC24DO94855 1032 aaPredicted RBP16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 ARSFP54793 590 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 PCBP4P57723 403 aaKnown RBP16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 HEPACAMQ14CZ8 416 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 SPESP1Q6UW49 350 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 SIX5Q8N196 739 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 PACRGLQ8N7B6 248 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 MSANTD3Q96H12 275 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 SIRT3Q9NTG7 399 aaPredicted RBP16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 SPAG17Q6Q759 2223 aa16.38■□□□□ 0.21
TMEM50B-210ENST00000542230 NINQ8N4C6 2090 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 LOC105369274A0A096LPK9 316 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 LOC102723532A0A0G2JNH3 316 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 G3V2T6 193 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 PDPK1O15530 556 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 NME6O75414 186 aaPredicted RBP16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 VIPP01282 170 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 C9P02748 559 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 ALPLP05186 524 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 C8orf89P0DMQ9 161 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 HIST1H1TP22492 207 aaPredicted RBP16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 ATP5A1P25705 553 aaKnown RBP16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 NDUFS1P28331 727 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 SERPINB1P30740 379 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 FCRL6Q6DN72 434 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 TNFAIP8L2Q6P589 184 aaPredicted RBP16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 ZC3H7AQ8IWR0 971 aaKnown RBP16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 OR4N4Q8N0Y3 316 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 MFSD9Q8NBP5 474 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 OR52N2Q8NGI0 321 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 OTUB1Q96FW1 271 aaPredicted RBP16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 ANKRD60Q9BZ19 345 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 EPS8L2Q9H6S3 715 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 SMPD3Q9NY59 655 aaPredicted RBP16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 ASB4Q9Y574 426 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 ZW10O43264 779 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 FKBP9O95302 570 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 ATP6V1B1P15313 513 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 RPL3P39023 403 aaKnown RBP16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 SLC36A3Q495N2 470 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 FRMPD2BQ6IN97 320 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 FKBP9P1Q75LS8 142 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 CBLL1Q75N03 491 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 CEP68Q76N32 757 aa16.37■□□□□ 0.21
TMEM50B-210ENST00000542230 TMEFF1Q8IYR6 380 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms