RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PNLIPP16233 465 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 HOXB9P17482 250 aaPredicted RBP13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 DDCP20711 480 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 ATP5A1P25705 553 aaKnown RBP13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 EEFSECP57772 596 aaKnown RBP13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 ARF3P61204 181 aaPredicted RBP13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 FOXC1Q12948 553 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 SLC9A5Q14940 896 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 ZC3H12BQ5HYM0 836 aaKnown RBP13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 MRM1Q6IN84 353 aaKnown RBP13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 FRMPD2BQ6IN97 320 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 AAGABQ6PD74 315 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 GATAD2AQ86YP4 633 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 NATD1Q8N6N6 113 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 FAM181AQ8N9Y4 354 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 KCT2Q8NC54 265 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 UTP15Q8TED0 518 aaKnown RBP13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 STMN2Q93045 179 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 PPCDCQ96CD2 204 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 ASB9Q96DX5 294 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 TCTN2Q96GX1 697 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 SMIM10Q96HG1 83 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 AHCYL2Q96HN2 611 aaKnown RBP13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 CCDC115Q96NT0 180 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 ANKRD27Q96NW4 1050 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 MAP3K3Q99759 626 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 RNPEPL1Q9HAU8 725 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 IL21RQ9HBE5 538 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 MIEF1Q9NQG6 463 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 VAPAQ9P0L0 249 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 SH3BP4Q9P0V3 963 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 PADI4Q9UM07 663 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 AP3M1Q9Y2T2 418 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 L3MBTL1Q9Y468 752 aa13.53□□□□□ -0.24
CYB561A3-216ENST00000540755 LOC105369274A0A096LPK9 316 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 A0A0G2JN53 185 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 LOC102723532A0A0G2JNH3 316 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 SLC9B1P1A6NJY1 282 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 C1QTNF9BB2RNN3 333 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 RFXANKO14593 260 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 DUX1O43812 170 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 PRAMEF10O60809 474 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 DNAJA2O60884 412 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 GUCY1B2O75343 617 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 C1QTNF9P0C862 333 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 ALDH4A1P30038 563 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 GFERP55789 205 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 OR1D5P58170 312 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 MC1RQ01726 317 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 TRAP1Q12931 704 aaKnown RBP13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 SUZ12Q15022 739 aaKnown RBP13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 ZNF385BQ569K4 471 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 RUNDC3AQ59EK9 446 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 ANKRD26P1Q6NSI1 321 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 FAM92BQ6ZTR7 304 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 ABHD13Q7L211 337 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 ANKRD46Q86W74 232 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 MSRB3Q8IXL7 192 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 OR4N4Q8N0Y3 316 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 DNAJC22Q8N4W6 341 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 RNF148Q8N7C7 305 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 AMER3Q8N944 861 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 ACOT4Q8N9L9 421 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 OR8K5Q8NH50 307 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 SH3GL1Q99961 368 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 FAM60AQ9NP50 221 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 LYARQ9NX58 379 aaKnown RBP13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 SLC25A37Q9NYZ2 338 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 PCDHB14Q9Y5E9 798 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 DMXL2Q8TDJ6 3036 aa13.52□□□□□ -0.25
CYB561A3-216ENST00000540755 SPAARA0A1B0GVQ0 90 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 TXNDC9O14530 226 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 SH3BP5O60239 455 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 ENTPD5O75356 428 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 C9P02748 559 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 FAM58BPP0C7Q3 252 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 DRD2P14416 443 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 ZNF10P21506 573 aaPredicted RBP13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 PTPN6P29350 595 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 GCKP35557 465 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 RAB8AP61006 207 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 PLIN5Q00G26 463 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 SLAMF1Q13291 335 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 TRIM25Q14258 630 aaKnown RBP13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 NR0B2Q15466 257 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 RABL3Q5HYI8 236 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 TICAM1Q8IUC6 712 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 CSNK1A1LQ8N752 337 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 NCSTNQ92542 709 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 MIEF2Q96C03 454 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 TGM7Q96PF1 710 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 GBP5Q96PP8 586 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 PHF12Q96QT6 1004 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 PANX1Q96RD7 426 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 CCDC3Q9BQI4 270 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 INPP5KQ9BT40 448 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 FAIM2Q9BWQ8 316 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 GTPBP2Q9BX10 602 aaKnown RBP13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 NLNQ9BYT8 704 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms