RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ZDHHC21Q8IVQ6 265 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 CNTN4Q8IWV2 1026 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 CRYBG2Q8N1P7 616 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 TMEM145Q8NBT3 493 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 PROKR1Q8TCW9 393 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 CREB3L4Q8TEY5 395 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 POF1BQ8WVV4 589 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 CREB3L1Q96BA8 519 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MSLNLQ96KJ4 702 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 SUSD3Q96L08 255 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 APOL5Q9BWW9 433 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 TAPBPLQ9BX59 468 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 ERVK-6Q9BXR3 956 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 GPR62Q9BZJ7 368 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF436Q9C0F3 470 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 FAM124BQ9H5Z6 455 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 CWH43Q9H720 699 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 ABCC13Q9NSE7 274 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 DNAJC11Q9NVH1 559 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MARCH5Q9NX47 278 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 NDRG3Q9UGV2 375 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 FBXL2Q9UKC9 423 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 IKZF3Q9UKT9 509 aa9.09□□□□□ -0.95
CTNNA1-243ENST00000540387 MPTX1A8MV57 137 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PDCD5O14737 125 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 VPS4BO75351 444 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 CREG1O75629 220 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 SIX3O95343 332 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 FGF2P09038 288 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ACAA1P09110 424 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 H2AFB1P0C5Y9 115 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 H2AFB2P0C5Z0 115 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 HAPLN1P10915 354 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ODC1P11926 461 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC1A2P43004 574 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 HNMTP50135 292 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 CLCN5P51795 746 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PRKG2Q13237 762 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PCID2Q5JVF3 399 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PYROXD2Q8N2H3 581 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 Q8N402 240 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 BVESQ8NE79 360 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 OR8J3Q8NGG0 315 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 OR52E4Q8NGH9 312 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 NUDT8Q8WV74 236 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 EXT2Q93063 718 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 HRASLS5Q96KN8 279 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 NSUN5Q96P11 429 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF251Q9BRH9 671 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 THUMPD3Q9BV44 507 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 VAPAQ9P0L0 249 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TSPAN16Q9UKR8 245 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PPIEQ9UNP9 301 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 USP3Q9Y6I4 520 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 A0A1B0GTL3 188 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 GRXCR2A6NFK2 248 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 E9PQ18 207 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TMEM189-UBE2V1I3L0A0 370 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 CD3EAPO15446 510 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 EIF3GO75821 320 aaKnown RBP eCLIP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PRAMEF1O95521 474 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 LPLP06858 475 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 OR56A5P0C7T3 313 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 CXCL3P19876 107 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 STOMP27105 288 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 LHX1P48742 406 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 BTG1P62324 171 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 PWP1Q13610 501 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 RTP2Q5QGT7 225 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 SPOUT1Q5T280 376 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 HES5Q5TA89 166 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 FAM171A1Q5VUB5 890 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 OR2T5Q6IEZ7 315 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 GPR153Q6NV75 609 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC16A13Q7RTY0 426 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 GPR149Q86SP6 731 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TP53INP2Q8IXH6 220 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TMEM86AQ8N2M4 240 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TMEM132CQ8N3T6 1108 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 OR2T29Q8NH02 315 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 GANCQ8TET4 914 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 COLEC11Q9BWP8 271 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 IKZF5Q9H5V7 419 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 B3GAT2Q9NPZ5 323 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 RAD18Q9NS91 495 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ZIM2Q9NZV7 527 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TDRD15B5MCY1 1934 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ALPK3Q96L96 1907 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 MYBPHLA2RUH7 354 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TTLL8A6PVC2 850 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ISM1B1AKI9 464 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 ZNF670-ZNF695F2Z2N8 137 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 TEX46H3BTG2 121 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 SLC28A1O00337 649 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 GFRA2O00451 464 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 LZTS3O60299 673 aaPredicted RBP9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 DIRAS1O95057 198 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 HTR3BO95264 441 aa9.08□□□□□ -0.96
CTNNA1-243ENST00000540387 GJB5O95377 273 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms